Transcript Information: R_Transcript_109198.p1


Annotated TAIR IDAT5G51545.1
Annotated Gene Namelow psii accumulation2
Annotated Gene Symbol(s)LPA2
Annotation TypeOrtholog
Chromosome Positionchr5:20936434-20937243 | Forward length=185
E-Value1E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0832385794431
Replicate 25.5363379207154
Replicate 37.6355791987175
Condition 2: 8 Hour
Replicate 16.4564718517612
Replicate 25.8961529232977
Replicate 36.4117629554601
Condition 3: 24 Hour
Replicate 15.4824614275114
Replicate 24.059923278365
Replicate 35.8802788711067


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109198.p1 GENE.R_Transcript_109198~~R_Transcript_109198.p1 ORF type:5prime_partial len:201 (+),score=54.27 R_Transcript_109198:2-604(+)
AACATGGCACTACTACCTCTTCAATCATCTTGCATCACCAACAAACCTCATCATCACCATCATCTCTACAAATCTCTCTCCTACCTACACATCACAAGACCCAAACTCACCATAACCTCTCAAGATTCGTCATCATCTTCACAATCCTCAAAACCCACCATTGAAGAACCACCTTCAAGCAAAAACCCCATTTCATCTGGACAAGGATTTGGGTCTGGGTCAGCCCAATTAGCCAAACCAAATGCAAGCCCAACAACTGGAAAGAAGAAACAAAAGGGAAAAAGAGAGAGGGCTTCAATCATACGGAGGTCTCCTGTAGAAAAGCCAGCTTTTTTGGATAAGAAACAAGAGGAGCAAATTAAAGAGCAGTCTTTGAATGAGAATGCCTTTTTGCTTACTTGGTTGGGCCTTGGTGGCCTCATTCTTGTTGAGGGCATTGCTCTTGCTGCCTCAGGGTTCCTGCCAGAAGAGTGGGATAAGTTGTTTGTGAAGTTTCTCTACCCATCATTTACACCAACAGTTTTCCTGTTTGTTGCTGGAACAGTTGCATATGGTGTTTTCAAGTACCTACAGAATGAGAATGTGAGTAACCCAAAGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109198.p1 GENE.R_Transcript_109198~~R_Transcript_109198.p1 ORF type:5prime_partial len:201 (+),score=54.27 R_Transcript_109198:2-604(+)
NMALLPLQSSCITNKPHHHHHLYKSLSYLHITRPKLTITSQDSSSSSQSSKPTIEEPPSSKNPISSGQGFGSGSAQLAKPNASPTTGKKKQKGKRERASIIRRSPVEKPAFLDKKQEEQIKEQSLNENAFLLTWLGLGGLILVEGIALAASGFLPEEWDKLFVKFLYPSFTPTVFLFVAGTVAYGVFKYLQNENVSNPKE*

Click here to download the sequence:
Link to NCBI Protein BLAST