Transcript Information: R_Transcript_109229.p1


Annotated TAIR IDAT4G24780.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12770631-12772227 | Reverse length=408
E-Value1.2E-264
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 147.190581980492
Replicate 220.074511617534
Replicate 327.879175757268
Condition 2: 8 Hour
Replicate 119.170640605038
Replicate 220.670181019047
Replicate 319.878227240375
Condition 3: 24 Hour
Replicate 139.86819206372
Replicate 218.881453342909
Replicate 359.41711052809


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109229.p1 GENE.R_Transcript_109229~~R_Transcript_109229.p1 ORF type:complete len:410 (+),score=78.58,Pec_lyase_C|PF00544.15|5.2e-20,Beta_helix|PF13229.2|3.9e-06 R_Transcript_109229:70-1299(+)
ATGGCATTACATTCATTCTCATTACTCTTTCTCTTAGTTTCTCTCCTAGCTCCTACTTTAGTTCTTTCTTCACGCCCTGCACCTGTCTCTGATCCTGAACTTGTAGTACATGAGGTCCATAGGAGTATCAATGAGTCAGTTGCTAGGAGGAACTTGGGCTACCTCTCATGTGGGACAGGGAACCCCATCGACGATTGCTGGCGTTGTGACCCTGATTGGGAGCAGAACCGCCAGCGGCTAGCTGATTGTGCAATTGGTTTCGGAAAGAACGCCATTGGTGGGAAAAATGGAAGGATTTACGTGGTCACTGACTCAGGAGACGACGACCCTGTGAACCCCAAACCAGGCACTCTTAGGCATGCTGTTATCCAAGATGAACCACTATGGATCATATTCCAAAGAGACATGGTGATAAGATTAAAGGAAGAACTTATCATGAATTCATTCAAAACAATTGATGGCAGAGGAGCTAGTGTTCACATTGCTGGAGGGCCTTGCATTACCATACAATATGTGACTAATATCATCATACATGGTATAAACATTCATGATTGTAAGCAAGGAGGGAATGCTATGGTGAGGAGCTCCCCACGGCACTACGGGTGGAGAACTATATCAGACGGTGATGGAGTGTCCCTTTTTGGTGCTAGTCATGTTTGGGTGGACCATTGCTCCTTGTCTAACTGTATGGATGGCTTGATTGATGCTATTATGGGGTCCACATCTATCACCATTTCAAACAATTTTATGACACACCATGATAAGGTCATGCTCTTGGGCCACAGTGATTCTTACACTCCTGACAAGAATATGCAAGTTACCATCGCCTTCAACCACTTTGGTGAAGGTCTTGTTCAGAGAATGCCAAGATGCAGACATGGATACTTCCATGTGGTGAACAATGACTACACCCATTGGGAAATGTATGCCATTGGTGGAAGTGCTGACCCTACCATCAATAGCCAAGGCAACAGGTTTCTTGCTCCTGATGACAGATTCAAGAAAGAGGTAACTAAACATGAGAATGCACCAACAAGTGAATGGAAGAACTGGAATTGGAGGTCAGAAGGTGACTTAATGCTTAATGGTGCATTTTTCACACCATCTGGGGCAGGAGCTGCATCAAGCTATGCAAGGGCCTCAAGTTTGGGAGCTAGGCCATCCTCCCTTGTTGCTTCACTTACTTCTAATGCTGGTGCACTTGTATGCAGAAAGGGTTCCCGTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109229.p1 GENE.R_Transcript_109229~~R_Transcript_109229.p1 ORF type:complete len:410 (+),score=78.58,Pec_lyase_C|PF00544.15|5.2e-20,Beta_helix|PF13229.2|3.9e-06 R_Transcript_109229:70-1299(+)
MALHSFSLLFLLVSLLAPTLVLSSRPAPVSDPELVVHEVHRSINESVARRNLGYLSCGTGNPIDDCWRCDPDWEQNRQRLADCAIGFGKNAIGGKNGRIYVVTDSGDDDPVNPKPGTLRHAVIQDEPLWIIFQRDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKQGGNAMVRSSPRHYGWRTISDGDGVSLFGASHVWVDHCSLSNCMDGLIDAIMGSTSITISNNFMTHHDKVMLLGHSDSYTPDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRFLAPDDRFKKEVTKHENAPTSEWKNWNWRSEGDLMLNGAFFTPSGAGAASSYARASSLGARPSSLVASLTSNAGALVCRKGSRC*

Click here to download the sequence:
Link to NCBI Protein BLAST