Transcript Information: R_Transcript_109371.p1


Annotated TAIR IDAT2G46000.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18921194-18922047 | Reverse length=208
E-Value2.5E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0656623050524
Replicate 27.160028713392
Replicate 39.0782462362632
Condition 2: 8 Hour
Replicate 17.6729899373856
Replicate 28.964961844162
Replicate 38.9503333473798
Condition 3: 24 Hour
Replicate 18.1463186937015
Replicate 29.4522538102474
Replicate 39.6830398614845


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109371.p1 GENE.R_Transcript_109371~~R_Transcript_109371.p1 ORF type:5prime_partial len:217 (+),score=42.99 R_Transcript_109371:1-651(+)
AAAATCGTCAAAGAAAACAAGCGAAAAAGCATGAACCACCAAACCAACCAACCTTTCTCTCTCCTCTACTTGCTCTCCATCACTCTAATTCTCACTCACATCACCGGAACCCAATTCCCATTTGCTAAGGCCGGAAAAGTTCACATTCCCGACGACCTCGACGACGTAATTGACGACGAGGAAGACGATGACTGGAAAAACTGGGGCAAGAAAAAATCCAGCCCTGATCAATTCGACCTTAACCCTTCTGATTTGGACAATATGGAGCCTTCTCAGATCCAAGCTGAGTTGATGAAACGTCAATCGGGTCCAGTTTACGGGTTTGTTAAGCTCAGATTTGGCGTCCAGAGAACCAAGGATTCTGTAGCTGAAACAGCTATGAGATGGAGTCAAATTCTTCAAACAGGAGGTCTTGAAGTGAGGTTCATGGGAATGGATCTTAGCACAATCATGTTCACCTCAGAGACGGCCAAGTACATTGATGAGGTGAAGGACTATATATTGGAGCAGCAGGATGCGTATGAAGTTAAGATAGGGGACAGCATTTACCGCAGACCCGGAGATCCTCCCCTGGAGGAGGTTCTACAGACTTTACGCAAAGAAAACGAAGCTACTGATGAGCACAAGGAGCGTGCAAAGGAAGAGTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109371.p1 GENE.R_Transcript_109371~~R_Transcript_109371.p1 ORF type:5prime_partial len:217 (+),score=42.99 R_Transcript_109371:1-651(+)
KIVKENKRKSMNHQTNQPFSLLYLLSITLILTHITGTQFPFAKAGKVHIPDDLDDVIDDEEDDDWKNWGKKKSSPDQFDLNPSDLDNMEPSQIQAELMKRQSGPVYGFVKLRFGVQRTKDSVAETAMRWSQILQTGGLEVRFMGMDLSTIMFTSETAKYIDEVKDYILEQQDAYEVKIGDSIYRRPGDPPLEEVLQTLRKENEATDEHKERAKEEL*

Click here to download the sequence:
Link to NCBI Protein BLAST