Transcript Information: R_Transcript_109400.p1


Annotated TAIR IDAT5G12950.1
Annotated Gene NamePutative glycosyl hydrolase of unknown function (DUF1680)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4093117-4096806 | Forward length=861
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5286425088281
Replicate 22.8885083809705
Replicate 33.6015217492217
Condition 2: 8 Hour
Replicate 13.793186014949
Replicate 23.7742066460267
Replicate 35.3300683208998
Condition 3: 24 Hour
Replicate 16.5025003130491
Replicate 24.666025869336
Replicate 35.8198521132791


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109400.p1 GENE.R_Transcript_109400~~R_Transcript_109400.p1 ORF type:complete len:865 (+),score=125.22,Glyco_hydro_127|PF07944.8|2.8e-135 R_Transcript_109400:190-2784(+)
ATGGGTTTTGGGGTAAATAGTGTTTTAGTGACAATTTCTTTGATTTTTCTATCTGGGGTTTATGTTCTTGATGCTAAGGAGTGTACAAACACTCCAACACATCTATCTTCTAAAACTTTAAGGTATGAATTTATGACTTCCAAAAATGAGACATGGAAGAAAGAAATAATGTCTCTTGCTCATGATCATGTGACCCCAACTGAGGAAGTTGCTTGGTCTGGTTTATTCCCTAGGAAGATGTTGAGAGAAGAAGATGAATTTGATTGGAATTTCATGTATAAGAAAATGAAATACTCTGATCAGTTTAATATGGGAGGGAATTTTCTCAAGGAAGTTTCACTTCATGATGTTAGGCTAGACCCTAAGTCATTGCATGGGCAAGCTCAATTGACAAATTTAGAGTATTTGTTGATCTTGGATTTGGATAGCTTGAGTTGGAGTTTTCGAAGAACTGCTGGTTTGCCCTCCCCTGGAAATCCTTATGGCGGTTGGGAAGCGCCCAATGTTGAGCTTCGCGGTCATTTTGTAGGGCATTACTTGAGTGCAACAGCACAAATGTGGGCAAGCACAAAAAATGAGACCCTAAGAGAGAAAATGACGGCTTTGGTATCGGCTCTCAAGGAGTGTCAGGATAAAATGGGAACAGGATACCTTTCTGCATTTCCATCCGAGTTATTTGACAGATTTGAAGCTATAAAACCTGTGTGGGCACCTTATTACACTATCCACAAGATTATGGCAGGGCTCTTAGATCAGTACAATCTTGCTGGCAATTCTCAAGCTTTAAAGATGGTGACATGGATGGCTAATTATTTTTACAAGCGTGTAGAGAATGTGATTAGAGAGCACAGTATTGAACAACATTGGCTCTCACTAAACGAAGAAACGGGTGGCATGAACGATGTCCTCTATCGGCTGTACAGTGTCACGGGTGATAAGAACCACTTGTTGCTGGCTCATCTTTTTGACAAGCCATGCTTTTTAGGAATACTTGCAATGAAGGCTGATGATATTGCTGGTTTTCATGCAAACACTCACATCCCCATTGTTATTGGTGCTCAAATGCGATATGAAATCACTGGTGATGAACTATATAAGGAAATAGGGACATTTTTCCTTGATGTTGTAAACTCAAGTCACAGCTTTGCAACAGGTGGAACATCAGTCTCTGAATTCTGGGCTGAGCCAAAGAGGTTAGCGGATAAGCTACACACTGAGGATGAAGAATCCTGTACAACCTACAATATGCTAAAGGTTTCACGGAACCTGTTTAGATGGACCAAAGAAGTGGCATATGCAGATTACTATGAGCGTGCTCTAACAAATGGTGTTCTAAGCATACAACGAGGAAGAGAGCCAGGTGTAATGATCTACATGCTTCCCCTAGGTCACGGAGTTTCCAAAGGAAGAAGTTACCACAGCTGGGGAGATCAGTTCAATTCTTTCTGGTGTTGCTATGGCACAGGAATCGAGTCATTCTCGAAATTAGGAGATTCCATATATTTCGAAGAGACAGGCAATGAACCAGGGCTATATGTAATACAGTACATATCTAGCTCGCTCAACTGGAGCTCTGGACAGATTTTACTAACACAGGATGTAGATAGTGTTGTTTCTTGGGATCCTCGCCTCAAAGTGAGGATAACAGCTTCAGCAAAGGGGAGTTCAGGGAAGGCTACCTTGAACTTGCGCATACCCTCTTGGACATCTTCAAATGGTCTAAAAGCTTCCTTAAATGGGGACCCTTTGTCTTTGCCAAATCCAGGTAATTTTCTATCTATATCAAGGAACTGGGGGAGTGGAGATGCAATTGCACTGGAGTTTCCCCTGGGTCTCCGAACCGAGGTTATTCAAGATGATCGCCCTCAATTCGCCTCGCTTCAGGCCATTCTGTATGGACCTTACTTGCTCGCGGGGCTATCTGCTGGCGACCATGACATCAAGACAGGATCAGTTAAATCTACTTCAGACTGGATGACTGCAATTCCAACCGAATACAATTCCCGATTGATCTCTCTGTCCCAGGACATTGGAGACATAAAGTTCTTCCTCTCAAACCAGAACCAAGTAATAACAATGCAAGGATCTCCGCAAGCAGGGAACGATTCTTATGTCCATGCTACTTTCAGGGTCATTTTGAAAGACTCATCTATGGGTAAAATGCCGGCACCAGAAGAAAGTCTTATTGGAAAAACAGTTATGTTAGAACCATTTGATCTTCCTGGAATGGTGGTTGTTTCCAAAGATACAGGGCTAATTGTCACAAATCCAAATGATGATAAGGAATCTGCCGAGTTTCTTATCGTCAAAGGGTTGAATGGAGAGGAAGGAACAGTTTCCATAAAATCAAAAGAGGGTTGTTTTGTATATAGTGGCGTAAAGTACAAAACAGGTGTAGATGTGAAGCTAAGTTGTGGTTCCGAGTCCTCAGATGATACACTCAAGGATGCCGCTAGCTTCATCGGGAATGCAGGCCTCAAGGAGTATCATCCTATAAGCTTTATGGCAAGAGGGTTGAGGAGAAGCTATGTTCTTGAACCATTACTGGGACTTAAAGATGAATCCTATAATGTTTATTTTGACATCACCAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109400.p1 GENE.R_Transcript_109400~~R_Transcript_109400.p1 ORF type:complete len:865 (+),score=125.22,Glyco_hydro_127|PF07944.8|2.8e-135 R_Transcript_109400:190-2784(+)
MGFGVNSVLVTISLIFLSGVYVLDAKECTNTPTHLSSKTLRYEFMTSKNETWKKEIMSLAHDHVTPTEEVAWSGLFPRKMLREEDEFDWNFMYKKMKYSDQFNMGGNFLKEVSLHDVRLDPKSLHGQAQLTNLEYLLILDLDSLSWSFRRTAGLPSPGNPYGGWEAPNVELRGHFVGHYLSATAQMWASTKNETLREKMTALVSALKECQDKMGTGYLSAFPSELFDRFEAIKPVWAPYYTIHKIMAGLLDQYNLAGNSQALKMVTWMANYFYKRVENVIREHSIEQHWLSLNEETGGMNDVLYRLYSVTGDKNHLLLAHLFDKPCFLGILAMKADDIAGFHANTHIPIVIGAQMRYEITGDELYKEIGTFFLDVVNSSHSFATGGTSVSEFWAEPKRLADKLHTEDEESCTTYNMLKVSRNLFRWTKEVAYADYYERALTNGVLSIQRGREPGVMIYMLPLGHGVSKGRSYHSWGDQFNSFWCCYGTGIESFSKLGDSIYFEETGNEPGLYVIQYISSSLNWSSGQILLTQDVDSVVSWDPRLKVRITASAKGSSGKATLNLRIPSWTSSNGLKASLNGDPLSLPNPGNFLSISRNWGSGDAIALEFPLGLRTEVIQDDRPQFASLQAILYGPYLLAGLSAGDHDIKTGSVKSTSDWMTAIPTEYNSRLISLSQDIGDIKFFLSNQNQVITMQGSPQAGNDSYVHATFRVILKDSSMGKMPAPEESLIGKTVMLEPFDLPGMVVVSKDTGLIVTNPNDDKESAEFLIVKGLNGEEGTVSIKSKEGCFVYSGVKYKTGVDVKLSCGSESSDDTLKDAASFIGNAGLKEYHPISFMARGLRRSYVLEPLLGLKDESYNVYFDITN*

Click here to download the sequence:
Link to NCBI Protein BLAST