Transcript Information: R_Transcript_109514.p1


Annotated TAIR IDAT3G51690.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19176731-19178107 | Reverse length=331
E-Value7E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27517026564903
Replicate 20.21101809463616
Replicate 30.46043693660608
Condition 2: 8 Hour
Replicate 11.1074009272623
Replicate 20.22473248081593
Replicate 30.18242824744107
Condition 3: 24 Hour
Replicate 10
Replicate 20.22166089337264
Replicate 30.43995386305321


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109514.p1 GENE.R_Transcript_109514~~R_Transcript_109514.p1 ORF type:complete len:199 (+),score=16.15,PIF1|PF05970.10|1.1e-16,Herpes_Helicase|PF02689.10|6.1e-06 R_Transcript_109514:832-1428(+)
ATGTTGGATTTATTGCCCGATGAAAAGAAAGTAGATAAAAGCTATGATTCTGTTTGTCCTGAGGATATGCCAAATGCTGCAACTGATGAGGTGTATTTAGTTTACTTGAATATTTTGAAGTTTTCTGGTTTACCTAACGATGAAATCACGTTGAAAGTTGGTGCTCCAATCATGTTGCTTAGAAATATTGATTGCTCAGGAGTTTTATGTAATGGAACAAGATTATGTATAACCCAGTCAGGAAATAATATTATTGAAGCAGATTTACTCACTGGCATTCAAATTAGAAATAAGGTATTCATACCTCGATTTTCATTAACGCCATCTGATACACATTTACCGTTCAAGTTTAGTCGGCGACAATTTCCTGTCAGGATATGTTTCGCTATGACTATTAATAAAAGTCAAGGACAGTCTCTTGAACGTGCTGGTGTTTATTTACCTTCACCCGTTTTCACACATGGCCAGCTTTATGTTGCCATTTCACGTGTAACAAATAGAGAAGGGTTGAAATTTCTCATATTAGATGAAAATGGCAGACCATGTAATACAACACTGAATGTAGTGTACAAAGAGATATTCAAAAATATCTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109514.p1 GENE.R_Transcript_109514~~R_Transcript_109514.p1 ORF type:complete len:199 (+),score=16.15,PIF1|PF05970.10|1.1e-16,Herpes_Helicase|PF02689.10|6.1e-06 R_Transcript_109514:832-1428(+)
MLDLLPDEKKVDKSYDSVCPEDMPNAATDEVYLVYLNILKFSGLPNDEITLKVGAPIMLLRNIDCSGVLCNGTRLCITQSGNNIIEADLLTGIQIRNKVFIPRFSLTPSDTHLPFKFSRRQFPVRICFAMTINKSQGQSLERAGVYLPSPVFTHGQLYVAISRVTNREGLKFLILDENGRPCNTTLNVVYKEIFKNIS*

Click here to download the sequence:
Link to NCBI Protein BLAST