Transcript Information: R_Transcript_109625.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeOrtholog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value2.8E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11988808508847
Replicate 20.034476683770604
Replicate 30.11284107190223
Condition 2: 8 Hour
Replicate 10.28144672353155
Replicate 20.22030425459296
Replicate 30.11922240144753
Condition 3: 24 Hour
Replicate 10.22618529288378
Replicate 20.072431063680057
Replicate 30.25158281249307


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109625.p1 GENE.R_Transcript_109625~~R_Transcript_109625.p1 ORF type:5prime_partial len:609 (+),score=94.51,RVT_1|PF00078.23|2.3e-23,rve|PF00665.22|1e+04,rve|PF00665.22|4.6e-10 R_Transcript_109625:3-1829(+)
GAACTCATGGATGAACTAAGGGAAGCCAAAATTTTCTCTAAGATTGATCTTAGGCAGGGTTATCATCAAGTTCGAATGCACCAAGATGATATCTTCAAGACAGCATTCAAAACCCATTTAGGACACTATGAATACCTGGTTATGCCCTTTGGGCTTACAAATGCCCCAGCCACCTTCCAGAACCTCATGAATGCAGTCTTTGCCCCTTATCTCAGGAAGTTTGTTTCGGTCTTTTTTGATGATATCTTAGTGTATAGCCCTGATTTCCATTCTCACTTACAACACTTGCAGCAGGTTTTTTCCCTCATGCAGCAGCATCAACTATTTGCAAAAGAATCCAAGTGTGCCTTTGCAGTCAAAAGGGTGGAATATCTGGGTCACTTCATTTCTGGAGAGGGTATATCTACAGATCCTAGTAAGATCCAAGCTGTCTTGGATTGGCCTGCACCATCTACATTGAAGCAGTTAAGAGGTTTCTTGGGCCTCACTGGTTATTATAGAAGGTTTGTTAAACACTATGGAGTGTTAGCAAAACCACTAACCCAACTGCTAAAAAAGAACCAATTTGAGTGGACAGAATCAGTTGAGACAGCTTTCCAGGCTCTCAAGAAAGCTATGACAAGCACTCCTATATTGGCTTTACCTGATTTCAGCAAACCTTTTGTGGTGGAAACAGATGCCTGTGCTACTGGTATTGGGGTAGTTCTTATGCAAGACCATCACCCTATAGCTTTTGTTAGTAGGGCTTTGGGCAAAAAACACCAAGGGCTATCTATCTATGAGAAAGAGTTACTAGCTGTTGTCTTTGTAGTTCAAAAATGGGGTACTTATCTCCTCAACAAGCACTTCATTATCAAAACTGATCAAAAGAGCTTGAAGTATTTGTTGGATCAGAAGGTTACCACACCTTTTCATCAAGAGTGGGTATCTAAATTGCTTGGGTTTGATTATGAGGTGCAGTATAAACAAGGTAAAGAAAATAGGGCAGCAGATGCCTTATCCAGGATTCAAGGCACAGAATTCCTACTAATGGCCATTCAGGCTATCAGTAACCCCCTGCTGGAACAAATCAAGACCTCTTGGCACATTGACCCCTACTTTAAGCAACTCATCCAGGACAAACAATCAGATCCCACATCCCATCCAAAATTTACATGGCACCAAGGTTTGCTCAGAAGGAAGGGGAAGATTGTGGTAGGGGCTCATGAGGAAGTCAGACAGGCCATTCTTACTTGGATGCATAGTACCCCTGCTGCAGGTCACTCAGGCGGACAAGCAACACTTCAGAGGGTGAGACAACTTTTTTACTGGAAGGGACTCACTAAGGCAGTCCAAGCCTTTGTAAGGCATTGTGATGTTTGTCAAAGGAACAAGGCAGATTTGGCAGCTTCTCCTGGATTACTGCAACCACTACCAGTGCCTACTAGAGCTTGGTCTAATATAACTATGGATTTTGTTGAGGGCCTACCTCCATCCATGGGGAAGGAAGTTATCATGGTAGTAGTGGATAGGCTCAGCAAGTATAGCCATTTCATTGCCCTATTTCACCCTTATTCTGCTATTACAGTGGCTCAAGCATTCAATGACAATGTCTTTAAACTCCAAGGTTTGACAGAAAGTATCACAAGTGATAGAAACCCTATTTTCATGAGTGAGTTTTGGAAGGAGTTGTTCACCATACAGGGAGTGGATATCAACCTGTCTTCAGCATATCACCCCCAGACTGATGGGCAGAGTGAAGTAGTGAACCGGGTTCTGGAAACATATCTCAGGTGCATATGTAGTGATACCCCAGGGTTGTGGAGCAAATGGCTTAGTCTAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109625.p1 GENE.R_Transcript_109625~~R_Transcript_109625.p1 ORF type:5prime_partial len:609 (+),score=94.51,RVT_1|PF00078.23|2.3e-23,rve|PF00665.22|1e+04,rve|PF00665.22|4.6e-10 R_Transcript_109625:3-1829(+)
ELMDELREAKIFSKIDLRQGYHQVRMHQDDIFKTAFKTHLGHYEYLVMPFGLTNAPATFQNLMNAVFAPYLRKFVSVFFDDILVYSPDFHSHLQHLQQVFSLMQQHQLFAKESKCAFAVKRVEYLGHFISGEGISTDPSKIQAVLDWPAPSTLKQLRGFLGLTGYYRRFVKHYGVLAKPLTQLLKKNQFEWTESVETAFQALKKAMTSTPILALPDFSKPFVVETDACATGIGVVLMQDHHPIAFVSRALGKKHQGLSIYEKELLAVVFVVQKWGTYLLNKHFIIKTDQKSLKYLLDQKVTTPFHQEWVSKLLGFDYEVQYKQGKENRAADALSRIQGTEFLLMAIQAISNPLLEQIKTSWHIDPYFKQLIQDKQSDPTSHPKFTWHQGLLRRKGKIVVGAHEEVRQAILTWMHSTPAAGHSGGQATLQRVRQLFYWKGLTKAVQAFVRHCDVCQRNKADLAASPGLLQPLPVPTRAWSNITMDFVEGLPPSMGKEVIMVVVDRLSKYSHFIALFHPYSAITVAQAFNDNVFKLQGLTESITSDRNPIFMSEFWKELFTIQGVDINLSSAYHPQTDGQSEVVNRVLETYLRCICSDTPGLWSKWLSLA*

Click here to download the sequence:
Link to NCBI Protein BLAST