Transcript Information: R_Transcript_109700.p1


Annotated TAIR IDAT3G46290.1
Annotated Gene Namehercules receptor kinase 1
Annotated Gene Symbol(s)HERK1
Annotation TypeHomolog
Chromosome Positionchr3:17013009-17015501 | Forward length=830
E-Value8E-166
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3612262226933
Replicate 21.8180158255199
Replicate 32.68347180668
Condition 2: 8 Hour
Replicate 12.7853191026578
Replicate 23.9482711570175
Replicate 35.9169936147951
Condition 3: 24 Hour
Replicate 15.2619761897115
Replicate 23.8943071725298
Replicate 35.2396712408362


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109700.p1 GENE.R_Transcript_109700~~R_Transcript_109700.p1 ORF type:3prime_partial len:589 (+),score=93.48,Malectin_like|PF12819.3|4.7e-41,Malectin|PF11721.4|4.4e-10,Malectin|PF11721.4|5.5e-06,Pkinase_Tyr|PF07714.13|1.7e-16,Pkinase|PF00069.21|2.9e-15 R_Transcript_109700:941-2704(+)
ATGGGTCACTCTAAGCTCAAACTAGTGTTACTGGTTTTGTCTGTGCTGTCTTTAGCCTGTTTTCTGAAAGAGGCTAATTCTGCTGCAGTCAATTACCTGATAGACTGTGCTGCCTCTAGCAATACAACGGTTGGTAACCGCGTTTTTGTGGCTGATCAATACTCCTCGGAATTTCTTTCCACTTCACAAAACATCTTAGGATCTACTTCTTCCAACTCTATTAAAGCCTCGAATTCAAAACTATACCTAACTGCTAGAGTCTTCACTGGAACATCAAAGTACACATTACCCATCAGCCAGACTGGTAGATACTTCATTCGCCTTTATTTCTACCCGTTTGAGTATCAAACTTACAAGATGAGCTCTGCAAGTTTTAGTGTTTCAGCTCAAGGGTTTGTGCTCCTCGGGGATTATACTCCTCCGAGTTCTCCTGTGGTGAAGGAATACTCGATGAATGTGACTACGGATACCCTTGTTATCACCTTTGCCCCCTCAGAGAGCTCGTTTGGTTTCTTGAATGCGTTAGAAGTTGTTTCAGTGCCGGATTCATTTATCATCGATGATGCTAGCGTAGTCAATCCATCAGGGAAGTTTAAAGGTTTGGCAACACAGGCGTTGGAGACTGTTGCTCGGGTGAATATGGGAGGACCAATGGTCAATTATGATAATGACACCCTTTGGCGAACTTGGGTTCCTGATGGTGGTTTCTTGATGAATAATGCATCTGCTGTAAATGTGAGTAACATCCAGGCTGTAAATTATCAGCCAGGCCTTGCGACAAAATATAGTGCTCCTGCTTCTGTTTATGGCACCGTCAAAGAGATGAATTCACAGAGTGATCCGAATTCTAATTTCAATGTCACTTGGAAGTTTGATGTGGAGCCAGGGTTTCAGTATCTTGTTCGGTTTCATTTTTGTGATATAGTGAGCACAAATTTGAATCAGCTGTATTTTAATGTTTATCTTAATACCTGGATTGTCTCCCCAGACCTGGATCTTGCTACTTTGACTGGTGCTTTGGCGACTCCTACTTTTCTCGATGCTGTTACACCCTTAGCAAAGAGCAAGGAGCTTCAAGTGAGTATTGGACCTTCCACTTTAAATAATGTTTACCCCAATGCTATCCTGAATGGGCTGGAGATTATGAAGATGAACAACTCCATGTCCAGTCTTAGTGGAAAGGTCTCTGCCCTAGCTGTCTCCGACAAAAGTTCCAAAGATAAGGTTGGGATCATTGTAGGTTGTACCGTTGGAGGGGTTTGTTTGCTTGTGTTGGCAGGCATTCTTTTCATCTTCTGTAGAAGAAGAAAGAGAAAACTCACACGCCAAGGCCTTTCAAAATCTTGGATTCCTTTGTCCCTTACTGGAGCCACTTCCCACTCGATGGGAAGTAAATACTCCCATGGTACAGCTACGAGTGTCGACTGCAACTTGAGCTATCGAATTCCTTTTGCAGCAGTTTTAGAAGCCACAAAAAATTTCGATGAGAGTCGAGTTATTGGGATTGGTGGTTTCGGGAAGGTGTACAAGGGAGAGCTAGCCGATGGTACAAAGGTTGCTGTCAAGAGAGGAAATCCTCGTTCCCAACAAGGTCTTGCAGAGTTCAGAACTGAGATTGAAATGCTTTCACAATTCCGGCATCGCCACTTGGTTTCTTTGATCGGGTACTGTGATGAAAAGAATGAGATGATCTTGATCTATGAATACATGGAAAATGGAACCCTCAAGAGTCACCTTTATGGTTCAGACCTTCCTAGTTTGAGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109700.p1 GENE.R_Transcript_109700~~R_Transcript_109700.p1 ORF type:3prime_partial len:589 (+),score=93.48,Malectin_like|PF12819.3|4.7e-41,Malectin|PF11721.4|4.4e-10,Malectin|PF11721.4|5.5e-06,Pkinase_Tyr|PF07714.13|1.7e-16,Pkinase|PF00069.21|2.9e-15 R_Transcript_109700:941-2704(+)
MGHSKLKLVLLVLSVLSLACFLKEANSAAVNYLIDCAASSNTTVGNRVFVADQYSSEFLSTSQNILGSTSSNSIKASNSKLYLTARVFTGTSKYTLPISQTGRYFIRLYFYPFEYQTYKMSSASFSVSAQGFVLLGDYTPPSSPVVKEYSMNVTTDTLVITFAPSESSFGFLNALEVVSVPDSFIIDDASVVNPSGKFKGLATQALETVARVNMGGPMVNYDNDTLWRTWVPDGGFLMNNASAVNVSNIQAVNYQPGLATKYSAPASVYGTVKEMNSQSDPNSNFNVTWKFDVEPGFQYLVRFHFCDIVSTNLNQLYFNVYLNTWIVSPDLDLATLTGALATPTFLDAVTPLAKSKELQVSIGPSTLNNVYPNAILNGLEIMKMNNSMSSLSGKVSALAVSDKSSKDKVGIIVGCTVGGVCLLVLAGILFIFCRRRKRKLTRQGLSKSWIPLSLTGATSHSMGSKYSHGTATSVDCNLSYRIPFAAVLEATKNFDESRVIGIGGFGKVYKGELADGTKVAVKRGNPRSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKSHLYGSDLPSLS

Click here to download the sequence:
Link to NCBI Protein BLAST