Transcript Information: R_Transcript_109704.p1


Annotated TAIR IDAT5G44150.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17763797-17765101 | Reverse length=355
E-Value2.7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4003889062001
Replicate 28.0440371724778
Replicate 39.5196831568426
Condition 2: 8 Hour
Replicate 15.246971060124
Replicate 28.5668313547399
Replicate 39.0758053101935
Condition 3: 24 Hour
Replicate 16.8575268342493
Replicate 27.3040143079185
Replicate 38.8119330557639


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109704.p1 GENE.R_Transcript_109704~~R_Transcript_109704.p1 ORF type:5prime_partial len:154 (+),score=44.35 R_Transcript_109704:2-463(+)
TCCACAGTAGATGCAACAGCAAATAAGTCGGTAAATGTAACAGAAAATAAATTAGACGACTTGGATTTTCTGGATGCTAGAGAATCGTCCTCAGTTACTCCTGATACCAAGCAAGATACTAGACCGTCCACATTTGAGGCAGCATCTGCAGAAGCAGAGCTTGATATGCTTCTGGGTTCATTCAGTGAGACAAAGCTTTCTGATTCTGTGAATCATGTACCTACAACACAAAATCCAGTTGGCTCGTCTAAACCTGTATTTCCTACCATCAGCAGTCTTGATGATGCCCTTGATGACTTGCTCGAGGAAACATCTAAGCCAAACAACAAAGATAGTATTATTCAATCTCTAGAGATTGAAGCTGCGGCTTCTGATATTCCACCCTCATCTTCCTTGCCTTCTGATCCTAGTTCCAAGTCCAAGGTTTTGGATGATTTTGATTCCTGGTTAGGTACATTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109704.p1 GENE.R_Transcript_109704~~R_Transcript_109704.p1 ORF type:5prime_partial len:154 (+),score=44.35 R_Transcript_109704:2-463(+)
STVDATANKSVNVTENKLDDLDFLDARESSSVTPDTKQDTRPSTFEAASAEAELDMLLGSFSETKLSDSVNHVPTTQNPVGSSKPVFPTISSLDDALDDLLEETSKPNNKDSIIQSLEIEAAASDIPPSSSLPSDPSSKSKVLDDFDSWLGTL*

Click here to download the sequence:
Link to NCBI Protein BLAST