Transcript Information: R_Transcript_10980.p1


Annotated TAIR IDAT2G27040.1
Annotated Gene NameArgonaute family protein
Annotated Gene Symbol(s)AGO4, OCP11
Annotation TypeOrtholog
Chromosome Positionchr2:11536795-11541503 | Reverse length=924
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1163.11114567436
Replicate 289.643295608545
Replicate 3123.85504440517
Condition 2: 8 Hour
Replicate 1129.18678746517
Replicate 2136.53689972724
Replicate 3149.31860641295
Condition 3: 24 Hour
Replicate 1177.84846767955
Replicate 2127.96346635539
Replicate 3170.97992687232


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_10980.p1 GENE.R_Transcript_10980~~R_Transcript_10980.p1 ORF type:complete len:924 (+),score=175.01,Piwi|PF02171.13|2.1e-102,PAZ|PF02170.18|1e-27,ArgoN|PF16486.1|6.8e-25,ArgoL1|PF08699.6|9.1e-16,ArgoL2|PF16488.1|8.4e-10,ArgoMid|PF16487.1|1e-06 R_Transcript_10980:99-2870(+)
ATGGATCCGCATGAAGGAAATGGTGCAGCGGATGGAAATGGTGCAACAGATGGCAATGGAACAGCGGATGCCTTGCCTCCCCCACCTCCCCCGCCAGCAGAGATACCTCCTAATGTTGTTCCAATTAAAGTAGAACAAGAGCCAAAAAAGAAAAGAGTTCCTATGGCCAGGCGTGGTCAAGGAACCAAAGGCAATAGGATTCAGCTTCTGAGTAATCACTTCAAAGTGAACATTTCTAATGTGGATGGCCATTTTTTCCACTACAGTGTTAATGTTATGTATGAGGATGGACGCCCTGTTGATGGTAAGGGTGTGGGACGAAAAGTTATTGACAGAGTTCATGAAACGTATGACACTGAACTTGCTGGAAAGGACTTTGCATATGATGGTGAAAAGAGCTTGTTCACAGTTGGAGCTCTTCCACGCAATAAGCTTGAGTTCACTGTTGTCTTGGAGGATGTCACTTCAGCTAGGAACAATAATGGTAATGCAAGTCCTGAAGGACAAGGGAGTCCAAATGAGACTGACCGGAAGAGAATACGTCGTCCGTATCAGTCTAAGACATTCAAAGTTGAACTCAGTTTCGCTGCTAAAATTCCAATGCAGGCCTTAACAAATGTGATACGTGGCCAGGAAAATGAAAACTCTCAAGAAGCTTTGAGGGTTCTTGATATTATCTTGCGGCAACATGCTGCCAAACAAGGCTGCCTGTTAGTTCGACAATCATTTTTCCATAACGATCCCAAGAACTTTGCAGATGTTGGAGGTGGTGTTCTTGGCTGCCGAGGGTTCCACTCTAGCTTCCGAGGCACTCAGGGAGGCCTCTCACTAAATATCGATGTCTCTACGACCATGATAATTCAGCCAGGTCCTGTAGTGGACTTTCTCATTGCAAATCAGAACGTGAGAGACCCTTATTCGATTGACTGGGCTAAGGCAAAAAGAATGCTGAAGAACTTGAGGATCAAGACAACGACTTCGAATCAGGAATTCAAAATTACTGGAATCAGTGAGAAGCCATGCAGAGAGCAGACGTTTTCACTGAAGCAACGAGAAAGGAATGAGGATGGTGAAGTCCAAACTGTAGAAGTTACAGTTTATGACTACTTTGTCAACAATCGCAATATAGATCTGCGCTACTCAGCTGACCTTCCTTGCATCAATGTTGGAAAGCCGAAGCGGCCCACCTATTTCCCCCTGGAGCTCTGTTCATTGGTTTCACTTCAGCGTTATACGAAATCCTTGTCAACACTTCAGCGTGCATCACTCGTGGAGAAATCTAGACAGAAGCCTCAAGAGAGGATGAGTGTGTTGTCTCATGCTTTGAAGGTCAGTAATTATGATGCGGAGCCCATGCTACGTTCATGTGGCATATCAATCAGTAGTGGCTTCACGCAAATTGATGGGCGTGTACTTCAAGCACCAAGGCTGAAGGTGGGAAATGGAGACGACTTTTTTCCGCGCAATGGGCGGTGGAATTTCAACAACAAGAAACTTGTGGAGCCAGCTAAGATAGAGCGTTGGGCAGTGGTGAACTTCTCCGCGCGCTGTGACACGCGGAATCTTGTCAGAGATCTGATCAAATGTGCTGAAATGAAAGGCATTGGCATTGAACCACCATTTGATGTCTTTGAGGAGAGCCCACAAAACAGACGTGCACCACCTCTTGTGAGAGTGGAAAAAATGTTTGAGGACGTACAGTCAAAACTTCCCGGGGCTCCTAAGTTTCTTTTATGTCTTCTTCCAGAGAGGAAGAACTGTGAACTCTATGGTCCATGGAAAAAGAAGAATCTTGCTGATTTTGGAATCGTGACACAGTGCATAGCTCCTACCAGAGTCAATGATCAGTATCTTACTAATGTGCTTCTGAAAATTAATGCTAAGCTTGGTGGGCTTAACTCATTGCTGGCTGTGGAGCACACTCCTTCAATACCTTTGGTTTCTAAAGTCCCAACGATAATTCTTGGTATGGATGTATCCCACGGATCGCCAGGACATTCTGATGTTCCATCTATTGCTGCTGTTGTCAGTTCCAGGCAGTGGCCATTGATTTCTCGATACAGAGCATCAGTTAGGACACAATCTCCCAAAGTTGAAATGATAGACAACTTATTTAAGCGTGTGTCCGACACCGAAGATGACGGAATCATTAGGGAGGCTCTGCTCGATTTCTATCTGAGTTCAGGGAAAAGAAAGCCAGAGCATATAATCATCTTCAGGGACGGAGTCAGTGAGTCCCAATTCAACCAAGTGCTGAACATTGAGTTGGACCAAATCATTGAGGCATGCAAGTTCCTTGATGAAAAGTGGAACCCTAAGTTTGTGGTGATTGTGGCCCAAAAGAATCACCACACGAAGTTCTTTCAGAATGGTGCTCCTGAGAATGTCCCTCCAGGAACAATAATTGACAACAAGGTCTGCCATCCAAGGAACTATGACTTTTATCTCTGTGCACATGCTGGAATGATCGGTACCACAAGGCCTACCCACTACCATGTTCTTTTGGACGAGGTTGGCTTTTCCCCTGATGACCTGCAGGATCTTGTCCACTCTCTCTCTTATGTGTATCAGAGGAGTACCACTGCTATCTCTGTCGTTGCCCCAGTCTGCTATGCTCATTTAGCCGCAACCCAAATCGGGCAATGGATGAAGTTCGAGGACACTTCAGAGACTTCCTCCAGCCATGGTGGTGTCACATCGGCTGGATCAGTCCCTGTTCCCCAGCTGCCAAGGCTGCAAGAGAATGTCTCAAGCTCCATGTTCTTCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_10980.p1 GENE.R_Transcript_10980~~R_Transcript_10980.p1 ORF type:complete len:924 (+),score=175.01,Piwi|PF02171.13|2.1e-102,PAZ|PF02170.18|1e-27,ArgoN|PF16486.1|6.8e-25,ArgoL1|PF08699.6|9.1e-16,ArgoL2|PF16488.1|8.4e-10,ArgoMid|PF16487.1|1e-06 R_Transcript_10980:99-2870(+)
MDPHEGNGAADGNGATDGNGTADALPPPPPPPAEIPPNVVPIKVEQEPKKKRVPMARRGQGTKGNRIQLLSNHFKVNISNVDGHFFHYSVNVMYEDGRPVDGKGVGRKVIDRVHETYDTELAGKDFAYDGEKSLFTVGALPRNKLEFTVVLEDVTSARNNNGNASPEGQGSPNETDRKRIRRPYQSKTFKVELSFAAKIPMQALTNVIRGQENENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRGTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPYSIDWAKAKRMLKNLRIKTTTSNQEFKITGISEKPCREQTFSLKQRERNEDGEVQTVEVTVYDYFVNNRNIDLRYSADLPCINVGKPKRPTYFPLELCSLVSLQRYTKSLSTLQRASLVEKSRQKPQERMSVLSHALKVSNYDAEPMLRSCGISISSGFTQIDGRVLQAPRLKVGNGDDFFPRNGRWNFNNKKLVEPAKIERWAVVNFSARCDTRNLVRDLIKCAEMKGIGIEPPFDVFEESPQNRRAPPLVRVEKMFEDVQSKLPGAPKFLLCLLPERKNCELYGPWKKKNLADFGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSLLAVEHTPSIPLVSKVPTIILGMDVSHGSPGHSDVPSIAAVVSSRQWPLISRYRASVRTQSPKVEMIDNLFKRVSDTEDDGIIREALLDFYLSSGKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWNPKFVVIVAQKNHHTKFFQNGAPENVPPGTIIDNKVCHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEVGFSPDDLQDLVHSLSYVYQRSTTAISVVAPVCYAHLAATQIGQWMKFEDTSETSSSHGGVTSAGSVPVPQLPRLQENVSSSMFFC*

Click here to download the sequence:
Link to NCBI Protein BLAST