Transcript Information: R_Transcript_109875.p1


Annotated TAIR IDAT2G20020.1
Annotated Gene NameRNA-binding CRS1 / YhbY (CRM) domain-containing protein
Annotated Gene Symbol(s)CAF1, ATCAF1
Annotation TypeOrtholog
Chromosome Positionchr2:8644464-8647090 | Forward length=701
E-Value2.8E-220
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9380765719637
Replicate 26.5032788900038
Replicate 37.5004362040499
Condition 2: 8 Hour
Replicate 16.0363383877532
Replicate 27.2934355436484
Replicate 38.7889593775072
Condition 3: 24 Hour
Replicate 18.5620140735432
Replicate 26.5245645769849
Replicate 37.4434798492736


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109875.p1 GENE.R_Transcript_109875~~R_Transcript_109875.p1 ORF type:5prime_partial len:791 (+),score=131.62,CRS1_YhbY|PF01985.17|5.1e-23,CRS1_YhbY|PF01985.17|5.7e-14 R_Transcript_109875:1-2373(+)
ATCGACATTCCTGAATTCCAGCTTTACACTCTTTCAGTATGCTCTGTGAGTATCTTTCTCCTTAAACATTACATGGCTCTCAAAACCGTTATCCCCTTCCCAATCTTCGCCCCAAACACCACCACAACCACCACCACACCCTCAATCACCGAAATCCGCTTTTCCCGATGGAACAACGCAAACGCCGACAAATTCAATCAACACCGCCGTACTCAACAACAAATCGAAGACGACCTCCGCCGTCACCGCCGCTTCCAATCCGCCCTCAACATCACCACTACCACCACCACTACCAACACCCCTTCTTCCCCCTCAACCACCTTCAAATCCACCGGCACCCCTTCTTCCCCTTCTCTCTCCTCCATCCCCTCCAAAAAATCCAAATACTCCAAACCCCACCAAAATCCAAGTCACCCCGCCTTTCAAAAGCTCCCCAAACTCTCCAAAGTCCCCGACAGGCAACAAGTCAAAGAAGTCAACGTCAAAGTCGACGAGGAGGGTTTATCCTACGTTGTCCCGGGGGCTCCATTCGAGTTCATGTACAGCTACACGGAGACCCCAAAAGTGAAGCCCATTGGGCTTCGGGAGCCCCCCGTTGCGCCCTTTGGGCCGGAGACTATGCCCCGGCCTTGGACCGGCCGGAAACCTTTGCCACCTAGTAAGAAGAATTTGCCTGAGTTTGATTCTTTTAATCCTCCTCCGGCGAATAAGAAGGGGGTTAAGCCGGTCCAACGGCCTGGGCCGTTTTTGGAAGGGTCCGGGCCGAGGTATGTGGTTTCAAGGGAGGAGTTGTTGGGGGAACCCTTGACGGAGGACGAGGTTAAGGAGCTTGTTGAGGGGTGTCGGAAGACTAAGAGGCAGCTCAACATGGGTAGAGATGGTTTGACACATAACATGTTGGATAACATCCATGCTCATTGGAAGCGGCGGAGGGTATGCAAGATCAAATGCAAAGGGGTCTGTACAGTTGACATGGATAATGTGTGCCACCAATTAGAGGAAAAGACTGGAGGGAAAGTTATACACCGTAGAGGAGGCATTATATACCTTTTCCGTGGTCGGAACTACAATTACAAGACTCGGCCTCGCTTTCCTCTTATGCTGTGGAAACCTGTCACACCTGTATACCCAAGATTAGTCAAACGAGTTCCAGAAGGCCTCACACTGGAGGAAGCAACTGATATGCGAAAGAGGGGATGTGACTTAACACCAATATGCAAGCTTGGAAAAAACGGTGTGTATGTTAACTTAGTGAAGGATGTCAGAGAGGCATTTGAAGCATGTGAGCTGGTACGGATAAACTGTCAAGGACTGAACCCAAGTGACTACCGTAAAATCGGGGCAAAGCTCAAGGATCTGGTCCCATGTGTGCTGATCTCATTTGAACATGAACACTTACTTATGTGGAGAGGAAGAGATTGGAAGTCATCTCTTGTACTACCTGAAGATGGTAGCATGGGTGAAAAGACTTCTGAAACTGACTCTGCTTCTTTTCTTACCTCAAGTGACCCCAGTTCCTTGTCTTCAGAGAATGAAGAAAGGTCTGCATTGTGTTCGTCAAGGGTGTCACGTCAAGGAACTAGTGTTGAAATGCCCAATTTCAGCACAGATTTGACTGAAAATTCAGATCAGGATGTTAACGAAGATGAGGAAATATCCTCTCAGAAGGATGACATGCTGTATGAGGTCGATGGTCTGATTTCTTCTCAGGCAAGTACCCTAGGAAGTGAAACAATGTCAGAATTTGGCAATTCTTTTGATCTTGTCGGATCTAGAATTCATACCAGAAAAACGGAAACCATAACAGTTGACAGTTTCTCTGGTAAGGAGGAGCCAACGTATGCATCTTTGCAGTCTGATTCTATGTTAGATGTGGATGATGTTGATGACAACAAATCCGCACCAGGAAACTACTCGGATGTTTCTGCAGTTCATGACACTTTGGAAACCATGTCAGAGAACTCACAAGAAATCAGTCCTCCATCAGCTTCGCCGAGTACGGAGGGTGTTCTATTTCTTCTGAGACAAGCTGTGGAAAATGGAAGTGCTGTAATACTTGACAGGAGTTGTTTAGATGCAGATGTGGTTTATCAAAGATCAGTTGCCTTTGCCCAGGTAGCTCCACCCGGACCTGTTTTTAGATACCGTCCTCGGAAAATTGCCATTCAAAAATCTGAAAAGAAAGAAAACGGGGACTTAGTGGTGGACAAGGCAATGCCAGTGCCTGAGAAGAAATCAAATGAGAAGAAGTCAACGGAAAAGAAGAGCTCTAGGACTCAAAGCCACAGGGCAAAAGATATTAAAGAAGATCATCTAAATGTAGTGCCTCAGGGAAGTCTGAAAGTAGATGAACTTGCTAAGTTGTTGGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109875.p1 GENE.R_Transcript_109875~~R_Transcript_109875.p1 ORF type:5prime_partial len:791 (+),score=131.62,CRS1_YhbY|PF01985.17|5.1e-23,CRS1_YhbY|PF01985.17|5.7e-14 R_Transcript_109875:1-2373(+)
IDIPEFQLYTLSVCSVSIFLLKHYMALKTVIPFPIFAPNTTTTTTTPSITEIRFSRWNNANADKFNQHRRTQQQIEDDLRRHRRFQSALNITTTTTTTNTPSSPSTTFKSTGTPSSPSLSSIPSKKSKYSKPHQNPSHPAFQKLPKLSKVPDRQQVKEVNVKVDEEGLSYVVPGAPFEFMYSYTETPKVKPIGLREPPVAPFGPETMPRPWTGRKPLPPSKKNLPEFDSFNPPPANKKGVKPVQRPGPFLEGSGPRYVVSREELLGEPLTEDEVKELVEGCRKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCHQLEEKTGGKVIHRRGGIIYLFRGRNYNYKTRPRFPLMLWKPVTPVYPRLVKRVPEGLTLEEATDMRKRGCDLTPICKLGKNGVYVNLVKDVREAFEACELVRINCQGLNPSDYRKIGAKLKDLVPCVLISFEHEHLLMWRGRDWKSSLVLPEDGSMGEKTSETDSASFLTSSDPSSLSSENEERSALCSSRVSRQGTSVEMPNFSTDLTENSDQDVNEDEEISSQKDDMLYEVDGLISSQASTLGSETMSEFGNSFDLVGSRIHTRKTETITVDSFSGKEEPTYASLQSDSMLDVDDVDDNKSAPGNYSDVSAVHDTLETMSENSQEISPPSASPSTEGVLFLLRQAVENGSAVILDRSCLDADVVYQRSVAFAQVAPPGPVFRYRPRKIAIQKSEKKENGDLVVDKAMPVPEKKSNEKKSTEKKSSRTQSHRAKDIKEDHLNVVPQGSLKVDELAKLLA*

Click here to download the sequence:
Link to NCBI Protein BLAST