Transcript Information: R_Transcript_109878.p1


Annotated TAIR IDAT1G06570.1
Annotated Gene Namephytoene desaturation 1
Annotated Gene Symbol(s)PDS1, HPD
Annotation TypeOrtholog
Chromosome Positionchr1:2012015-2013543 | Reverse length=473
E-Value3.6E-229
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.313770570024
Replicate 213.997533610865
Replicate 318.448379272069
Condition 2: 8 Hour
Replicate 127.717780007396
Replicate 251.775196209457
Replicate 358.881063533694
Condition 3: 24 Hour
Replicate 123.522764452547
Replicate 215.295593414047
Replicate 322.867020332843


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109878.p1 GENE.R_Transcript_109878~~R_Transcript_109878.p1 ORF type:complete len:447 (+),score=14.75,Glyoxalase|PF00903.21|0.55,Glyoxalase|PF00903.21|6.8e-06,Glyoxalase_4|PF13669.2|0.005,Glyoxalase_4|PF13669.2|0.019 R_Transcript_109878:300-1640(+)
ATGGGCGCAGTCGACCAAACCCAAACCCAAATTCAGACCGGCACCGATTTCAACCTGGTCGGTTTTTCCAACTTCGTCCGACTTAACCCCCGGTCAGACCGCTTCCCGGTCAAACGCTTCCACCACGTGGAATTCTGGTGCGGCGACTCCACCAATGTGTCCCGCCGCTTCTCATGGGGACTCGGCATGCCGATTGTCGCCAAATCCGACCTCTCCACCGGCAACCCGGTGCACGCCTCTTACCTCCTCCGGTCCGGCGACCTCAACGTCCTCTTCACCTCCCCTTACTCCCAGTCTCACTCTCTCTCCTCCACGTCAGCAGCCACCATTCCAACCTTCAGCTTCTCTCTCCACTCCTCCTTCCTCTCCTCCCACGGCCTCGGGGTCCGCGCCGTGGCCCTCGAAGTCGACGACGCTGAAGCCGCCTTCCATGTCAGCGTCTCCCACGGGGCCCACCCCGTCTCCCCTCCAATCCACCTCTCTCAAGACGCCGCCGTTTTATCCGAAGTCCACCTCTACGGCGATGTCGTTTTGCGCTACATCAGCTACACCAACTCAAACCCTAGAAACCCTAAAAACCCTAGCGAGTGGTTTCTCCCTGGGTTTGCCCCAATGCCGGAGGAATCCTCGTTCCAAGGCCTCGACTACGGAATCCGAAGACTCGATCATGCCGTGGGGAACGTCCCCGAGCTGGGCCCCGCAATCGAGTACGTGAAGCGGTTCACCGGGTTCCACGAGTTCGCCGAGTTCACTGCGGAAGACGTGGGGACGAGTGAGAGCGGGTTGAACTCGGCCGTGCTGGCCAACAACGATGAGACCGTCTTAATGCCGATGAACGAGCCGGTTTACGGGACCAAGAGGAAGAGCCAAATACAGACTTACTTGGAGCACAATGAAGGGGCTGGGGTCCAGCATTTGGCATTGACTAGTGAGGATATATTCTGGACCTTGAGGGAGATGAGGAAGCGGTCCGGGATTGGCGGGTTCGAGTTTATGCCGTCCCCGCCACCGACTTATTACCGGAATCTGAGGAACCGGGCGGCCGATGTTTTGACCGAGGAGCAGATGAAGGAGTGTGAGGAGCTTGGGATTTTGGTTGACAGGGATGATCAGGGTACCTTGCTTCAGATCTTCACTAAGCCTATTGGGGACAGGCCAACCATGTTCATCGAGATAATCCAAAGAGTCGGTTGCATGATGAAGGACGAGGAAGGGAAGGAGTACCAAAAGGGCGGTTGTGGAGGATTTGGAAAGGGAAACTTTTCAGAGCTTTTCAAGTCAATTGAGGAGTATGAGAAGACGCTTGAGCGCAATTCAGTCACAGATGCTGCTGCTGCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109878.p1 GENE.R_Transcript_109878~~R_Transcript_109878.p1 ORF type:complete len:447 (+),score=14.75,Glyoxalase|PF00903.21|0.55,Glyoxalase|PF00903.21|6.8e-06,Glyoxalase_4|PF13669.2|0.005,Glyoxalase_4|PF13669.2|0.019 R_Transcript_109878:300-1640(+)
MGAVDQTQTQIQTGTDFNLVGFSNFVRLNPRSDRFPVKRFHHVEFWCGDSTNVSRRFSWGLGMPIVAKSDLSTGNPVHASYLLRSGDLNVLFTSPYSQSHSLSSTSAATIPTFSFSLHSSFLSSHGLGVRAVALEVDDAEAAFHVSVSHGAHPVSPPIHLSQDAAVLSEVHLYGDVVLRYISYTNSNPRNPKNPSEWFLPGFAPMPEESSFQGLDYGIRRLDHAVGNVPELGPAIEYVKRFTGFHEFAEFTAEDVGTSESGLNSAVLANNDETVLMPMNEPVYGTKRKSQIQTYLEHNEGAGVQHLALTSEDIFWTLREMRKRSGIGGFEFMPSPPPTYYRNLRNRAADVLTEEQMKECEELGILVDRDDQGTLLQIFTKPIGDRPTMFIEIIQRVGCMMKDEEGKEYQKGGCGGFGKGNFSELFKSIEEYEKTLERNSVTDAAAA*

Click here to download the sequence:
Link to NCBI Protein BLAST