Transcript Information: R_Transcript_109883.p1


Annotated TAIR IDAT3G51325.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19052259-19052531 | Forward length=90
E-Value3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.600821328819
Replicate 28.0755001601146
Replicate 310.572340428993
Condition 2: 8 Hour
Replicate 19.2083594673401
Replicate 26.1157967428884
Replicate 32.0168456244874
Condition 3: 24 Hour
Replicate 15.2979555140856
Replicate 211.498895660899
Replicate 34.3027111777661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109883.p1 GENE.R_Transcript_109883~~R_Transcript_109883.p1 ORF type:complete len:117 (-),score=20.84,zf-RING_2|PF13639.2|1.3e-11,zf-RING_11|PF17123.1|5.2e-08,zf-RING_11|PF17123.1|1.4e+03,zf-C3HC4|PF00097.21|4.9e-07,zf-RING_5|PF14634.2|1.8e-06,zf-C3HC4_3|PF13920.2|1.9e-06,zf-rbx1|PF12678.3|6.3e-06 R_Transcript_109883:210-560(-)
ATGCAGAACATCATATGCGTGATATTCAACTTGATTGGCCTAAGAAGAAGGCTCGACGAATCGAATCAGAAGCTTCAAGTTGTTCATTCCGACGATGATTTATGTTGTGTTTGCTTGTCAAGGCTAACAAAAGAAGGCCAAGATATAAGGGTTCTACCTTGCCTTCACCCTTTCCACTCAGCTTGTGTGGACCAGTGGTTCAATGCTCGGCGTAAAACATGTCCAATTTGCAGGTTTCTAGTGGAAGAAGATCATCATAAGATGGGTAAGGAGGATGAAGAGTTGACTGAGGAAATGATCATTTGGTATTCATCTTCTTTTCATGTAGCTGGCTTTTCTGGCTTTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109883.p1 GENE.R_Transcript_109883~~R_Transcript_109883.p1 ORF type:complete len:117 (-),score=20.84,zf-RING_2|PF13639.2|1.3e-11,zf-RING_11|PF17123.1|5.2e-08,zf-RING_11|PF17123.1|1.4e+03,zf-C3HC4|PF00097.21|4.9e-07,zf-RING_5|PF14634.2|1.8e-06,zf-C3HC4_3|PF13920.2|1.9e-06,zf-rbx1|PF12678.3|6.3e-06 R_Transcript_109883:210-560(-)
MQNIICVIFNLIGLRRRLDESNQKLQVVHSDDDLCCVCLSRLTKEGQDIRVLPCLHPFHSACVDQWFNARRKTCPICRFLVEEDHHKMGKEDEELTEEMIIWYSSSFHVAGFSGFF*

Click here to download the sequence:
Link to NCBI Protein BLAST