Transcript Information: R_Transcript_109922.p1


Annotated TAIR IDAT1G29730.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10400710-10405874 | Reverse length=969
E-Value1.9E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.268895945692
Replicate 23.3671043050192
Replicate 33.8571482550222
Condition 2: 8 Hour
Replicate 13.4779464529879
Replicate 22.9455915369259
Replicate 33.9505223572434
Condition 3: 24 Hour
Replicate 13.6553667865417
Replicate 22.7032218800593
Replicate 32.7077572808533


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109922.p1 GENE.R_Transcript_109922~~R_Transcript_109922.p1 ORF type:3prime_partial len:873 (+),score=126.54,Pkinase_Tyr|PF07714.13|8.1e-47,Malectin|PF11721.4|5.8e-45,Pkinase|PF00069.21|1.4e-44,LRR_8|PF13855.2|0.00072,LRR_8|PF13855.2|0.00019,LRR_8|PF13855.2|0.015,LRR_8|PF13855.2|0.00061,LRR_8|PF13855.2|0.0015,LRR_8|PF13855.2|4e-06,LRR_8|PF13855.2|5.8e+03,LRR_4|PF12799.3|56,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|0.49,LRR_4|PF12799.3|0.22,LRR_4|PF12799.3|0.079,LRR_4|PF12799.3|0.78,LRR_4|PF12799.3|0.0018,LRR_1|PF00560.29|7.8e+02,LRR_1|PF00560.29|9e+02,LRR_1|PF00560.29|8.5e+03,LRR_1|PF00560.29|61,LRR_1|PF00560.29|87,LRR_1|PF00560.29|0.63,LRR_1|PF00560.29|2.9e+03,LRR_1|PF00560.29|6.5e+02,LRR_1|PF00560.29|0.15,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|1.6e+04 R_Transcript_109922:617-3232(+)
ATGGGAGCCTCTGTTAGTAATCTGCTTAATGTACTGACACTTGTTTTCATGTGGGTTTTGCTTTCCCAGTTGGGTTCAAGCAGTGATGATTGTCAAGTAACAGCTGAAAGTGAAGTGAATGCCCTTCGCCATATTGCACAGGAACTAGGCAAAAAAGATTGGAATTTCAAAGAGCATCCTTGTACTAATGGCACAAGTTGGTTCTCTGAGTTCAACCCTGCTAAGCAAAATTATATTAATCAAGTTATCTGCGAGTGTTTTAAAGGCAGGCGGCATTTGACAAGTTTAATTCTTAAGGGTCAAAATCTTCCTGGTGTTCTTCCAAAATCTTTAGCAAAGTTGCGGTACCTGAAGAAAATTGATGTATCGAGGAACCTTCTCAAAGGCACAATTCCACAAGAATGGGCCACTATGAAGTTGGAATACATGTCTCTTATGGTCAATCAACTGTCGGGCCACATCCCCAAGTACCTGGGGAATATTACCACTCTCAAGTATTTGAGCATCGAGAGCAATTCATTTTCTGGAACTGTGCCTGCAGAACTGGGAAGGCTGTTCAACTTATGGAATCTGACTCTTAGTGATAACTTTCTTACAGGAAAGTTACCGGTTGAGCTCAAGAACTTGACCAATCTGACTGAACTTAAGATAAGCAGTAATAACTTCAGTGGACAAATACCGAATTATTTTCAGAATTGGAAACGACTACAGAAGCTGGAGATCCAAGGCAGTGGCTTTGATGGGCCTATACCTTCTAGCATTTCTGTTTTGACTAACTTAAAAGAACTAAGGATTAGTGATTTGAATGGAGAGGGTTCTCAGTTTCCACCACTGCAAAACCTAAAAAGCTTGCTAAGATTGATGCTCAGGAGCTGTAAGCTTTATGGACCTATTCCTCCCTACATAGGAGGCTTGACAAGCTTAAAAATATTGGATCTCAGTTTCAATAATTTGAACGGCTCTATTCCAAATGAGCTTCAATTTTTGACTTCCTTGCAAAATTTGTATCTGACAAGAAATATGTTGAGTGGACCCATTCCCGATTGGATCACAAACAAGAACGACAACAGCCACATAGATCTTTCCTACAATATCTTTGATAAGCGGTCTGCAGCATCTTCTTGTAATAGAGAAACAGAAACCTTAAACTTATACAGAAGCTTTTCAAGGGAACAGAGTCTAAAATCAAGTATGTGCCTCAAGCATTCCCACTGTAAAGCACGGTATTCCTTACATATCAATTGCGGAGGAATGGGGACCACCATTGGCGATGCTGTCTATGAGCAAGATAATGAGGCTGGAGGTGCAGCCAAGTTTGTCCACAGAAGTGCAGAGTGGGGATTTAGTAGCAGCGGAGAGTTTTGGTTTGGAAAAGCTTCGGGTGATTATATAGCAAGAAATAACTCAATTTTAAGAATGAATGACTCAGAGCTTTACATGGAAGCGCGGCTGTCTGCAACAGCCCTGACATACTATGGCAGTTGCTTAGGAAAAGGAAACTATACTGTGACACTTTACTTCTCTGATATTGTTTTTACTAACAGTTCAATTTACAGTCTTGGACGCCGGATGTTTGACATTTACGTCCAGGAAAAATTGGTTCAGAAGGATTTTGATATTAGAAAGGAAGCTAATGTAACCAGTAAGGTGGCAAAGAAAGTGTATGAACACATATCAGTGAGTGACACAATAGAAATTCGTTTCTACTATGCTGGAAAAGGAAGCACAGCAATCCCAGTGAGAGGAACATATGGTCCACTTATCTCAGCTATTTCTGTGGAATCTGAGTTCAAGCCACCTCCTGATCCAAAGAAGCTTTTAAGGATCTTACTTGGAGCAGCATCAGCAATAGTGTGCTTCATTCTCGCTATAGTTATTGCTTTGTGGAAATGTTGTTCCAAAGATACTAGGTCGCGAGAACAAGATCTAGCAATGTTTGATCTGCAAACTGGTGTATTTACGCTTAGGCAAATCAAAGCTGCCACTGACAATTTCAATCCAAAATGTAAGATTGGAGAAGGTGGTTTTGGATCAGTATACTTGGGTACACTGTTGGATGGCACCAATATTGCTATCAAGCAACTTTCATCGAAATCATCACAGGGGAATCGAGAATTCGTTACTGAGATAGGCATGATTTCTGGTTTGCACCACCCAAATGTTGTAAGATTATATGGATGCTGTGTCGAGGGAAGCCAACTTATCCTGGTTTATGAATATATGGAGAACAATAACCTTGCACTTGCATTATTTGATGAGGTTCAACTGAAACTGGACTGGCCTTCTAGGCAGAGGATCTGCATTGATGTTGCAAGGGGTTTGACCTTTTTGCATGAGGAGTCAACAATAAAAATAGTCCACAGAGACATCAAAGCTACAAATATACTACTCGACAAAGACCTTCATGCTAAGATTTCAGACTTTGGATTGGCCAAGCTGGATGAAGTAGAGAACACACACATCAGTACCAGAGTTGCTGGGACAATAGGATACATGGCTCCAGAATATGCACTGCGAGGGTATTTGACATACAAAGCAGATGTTTACAGCTTTGGGGTTGTGGCGTTGGAGATAGTTACTGGGAGAAGCAATACAAAGTTTCGGCCCGATGAAAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109922.p1 GENE.R_Transcript_109922~~R_Transcript_109922.p1 ORF type:3prime_partial len:873 (+),score=126.54,Pkinase_Tyr|PF07714.13|8.1e-47,Malectin|PF11721.4|5.8e-45,Pkinase|PF00069.21|1.4e-44,LRR_8|PF13855.2|0.00072,LRR_8|PF13855.2|0.00019,LRR_8|PF13855.2|0.015,LRR_8|PF13855.2|0.00061,LRR_8|PF13855.2|0.0015,LRR_8|PF13855.2|4e-06,LRR_8|PF13855.2|5.8e+03,LRR_4|PF12799.3|56,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|0.49,LRR_4|PF12799.3|0.22,LRR_4|PF12799.3|0.079,LRR_4|PF12799.3|0.78,LRR_4|PF12799.3|0.0018,LRR_1|PF00560.29|7.8e+02,LRR_1|PF00560.29|9e+02,LRR_1|PF00560.29|8.5e+03,LRR_1|PF00560.29|61,LRR_1|PF00560.29|87,LRR_1|PF00560.29|0.63,LRR_1|PF00560.29|2.9e+03,LRR_1|PF00560.29|6.5e+02,LRR_1|PF00560.29|0.15,LRR_1|PF00560.29|1.5e+02,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|1.6e+04 R_Transcript_109922:617-3232(+)
MGASVSNLLNVLTLVFMWVLLSQLGSSSDDCQVTAESEVNALRHIAQELGKKDWNFKEHPCTNGTSWFSEFNPAKQNYINQVICECFKGRRHLTSLILKGQNLPGVLPKSLAKLRYLKKIDVSRNLLKGTIPQEWATMKLEYMSLMVNQLSGHIPKYLGNITTLKYLSIESNSFSGTVPAELGRLFNLWNLTLSDNFLTGKLPVELKNLTNLTELKISSNNFSGQIPNYFQNWKRLQKLEIQGSGFDGPIPSSISVLTNLKELRISDLNGEGSQFPPLQNLKSLLRLMLRSCKLYGPIPPYIGGLTSLKILDLSFNNLNGSIPNELQFLTSLQNLYLTRNMLSGPIPDWITNKNDNSHIDLSYNIFDKRSAASSCNRETETLNLYRSFSREQSLKSSMCLKHSHCKARYSLHINCGGMGTTIGDAVYEQDNEAGGAAKFVHRSAEWGFSSSGEFWFGKASGDYIARNNSILRMNDSELYMEARLSATALTYYGSCLGKGNYTVTLYFSDIVFTNSSIYSLGRRMFDIYVQEKLVQKDFDIRKEANVTSKVAKKVYEHISVSDTIEIRFYYAGKGSTAIPVRGTYGPLISAISVESEFKPPPDPKKLLRILLGAASAIVCFILAIVIALWKCCSKDTRSREQDLAMFDLQTGVFTLRQIKAATDNFNPKCKIGEGGFGSVYLGTLLDGTNIAIKQLSSKSSQGNREFVTEIGMISGLHHPNVVRLYGCCVEGSQLILVYEYMENNNLALALFDEVQLKLDWPSRQRICIDVARGLTFLHEESTIKIVHRDIKATNILLDKDLHAKISDFGLAKLDEVENTHISTRVAGTIGYMAPEYALRGYLTYKADVYSFGVVALEIVTGRSNTKFRPDEN

Click here to download the sequence:
Link to NCBI Protein BLAST