Transcript Information: R_Transcript_109962.p1


Annotated TAIR IDAT5G67620.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: microtubule; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26964891-26965720 | Reverse length=182
E-Value5.8E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1874439837296
Replicate 22.9641835881833
Replicate 32.6949103054297
Condition 2: 8 Hour
Replicate 12.3045519950348
Replicate 22.1045535850528
Replicate 32.9896770433579
Condition 3: 24 Hour
Replicate 14.5915614455408
Replicate 21.9460522550509
Replicate 36.3088089979881


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109962.p1 GENE.R_Transcript_109962~~R_Transcript_109962.p1 ORF type:complete len:170 (+),score=25.06,DUF4228|PF14009.2|1.9e-29 R_Transcript_109962:367-876(+)
ATGGGGAATTGCCAGGCAGCAGAGGCGGCATCCGTGGTGATTCAGCATCCGGGAGTGAAAGGCAAGGTGGAGCGAATATACCGGGCTGTTGCCGCTAGCCAGGTTATGTGTTCGAATCCGGGCCACTACGTTGCTCTTGTTTTCAAGTCCCCGGCCCAGCCCAATGGCCCTCCTGTCAAGCAACTCAAGCTCCTCAGGCCTGATGAAACCTTGCACATTGGCCATGTTTATCGCCTCATTACTTTCGAAGATGTTATAAAGGAATTTACGGCGAAGAAGTCGGTAAAATTGGGCAAATTGATTGGGGCTCATGACAAGAGGAAGAAATTGGATGCTGGTAGTGGTAGTTCCAAACAAGATAATACGGACTCCGCTGAGATGGAGGAATTGGATCACCTGCTAAGCAATACGGTCAGTAACAGCAGCAGTGGCAGAGGAGTTGGTAGGCATCATGGTGGCGGGGGTCAATGGAAGCCAGCCTTACAAAGCATAACCGAAATTGGCACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109962.p1 GENE.R_Transcript_109962~~R_Transcript_109962.p1 ORF type:complete len:170 (+),score=25.06,DUF4228|PF14009.2|1.9e-29 R_Transcript_109962:367-876(+)
MGNCQAAEAASVVIQHPGVKGKVERIYRAVAASQVMCSNPGHYVALVFKSPAQPNGPPVKQLKLLRPDETLHIGHVYRLITFEDVIKEFTAKKSVKLGKLIGAHDKRKKLDAGSGSSKQDNTDSAEMEELDHLLSNTVSNSSSGRGVGRHHGGGGQWKPALQSITEIGT*

Click here to download the sequence:
Link to NCBI Protein BLAST