Transcript Information: R_Transcript_109963.p2


Annotated TAIR IDAT5G67620.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: microtubule; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26964891-26965720 | Reverse length=182
E-Value2E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7005864243527
Replicate 21.6953534497632
Replicate 31.5650566059483
Condition 2: 8 Hour
Replicate 13.4979807067493
Replicate 22.9166367618938
Replicate 32.4803443083759
Condition 3: 24 Hour
Replicate 11.7111409113817
Replicate 22.0548377848364
Replicate 32.9908664789549


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_109963.p2 GENE.R_Transcript_109963~~R_Transcript_109963.p2 ORF type:3prime_partial len:161 (+),score=19.72,DUF4228|PF14009.2|2.4e-23 R_Transcript_109963:367-846(+)
ATGGGGAATTGCCAGGCAGCAGAGGCGGCATCCGTGGTGATTCAGCATCCGGGAGTGAAAGGCAAGGTGGAGCGAATATACCGGGCTGTTGCCGCTAGCCAGGTTATGTGTTCGAATCCGGGCCACTACGTTGCTCTTGTTTTCAAGTCCCCGGCCCAGCCCAATGGCCCTCCTGTCAAGCAACTCAAGCTCCTCAGGCCTGATGAAACCTTGCACATTGGCCATGTTTATCGCCTCATTACTTTCGAAGATGTTATAAAGGAATTTACGGCGAAGAAGTCGGTAAAATTGGGCAAATTGATTGGGGCTCATGACAAGAGGAAGAAATTGGATGCTGGTAGTGGTAGTTCCAAACAAGATAATAAGGACTCCGCTGAGATGAGTTTGAATGAGCCTGTACTTGGATGTTACTTGGAATACGAAGAGCTCGAGTCCGATGTTACTTTTCATACGTGGGAATGCAGTTGCGCGGCAAGGCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_109963.p2 GENE.R_Transcript_109963~~R_Transcript_109963.p2 ORF type:3prime_partial len:161 (+),score=19.72,DUF4228|PF14009.2|2.4e-23 R_Transcript_109963:367-846(+)
MGNCQAAEAASVVIQHPGVKGKVERIYRAVAASQVMCSNPGHYVALVFKSPAQPNGPPVKQLKLLRPDETLHIGHVYRLITFEDVIKEFTAKKSVKLGKLIGAHDKRKKLDAGSGSSKQDNKDSAEMSLNEPVLGCYLEYEELESDVTFHTWECSCAARQ

Click here to download the sequence:
Link to NCBI Protein BLAST