Transcript Information: R_Transcript_110101.p1


Annotated TAIR IDAT3G16170.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5476490-5480128 | Forward length=544
E-Value3.5E-263
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.760556229648
Replicate 216.703127168237
Replicate 318.662038616674
Condition 2: 8 Hour
Replicate 118.462185711022
Replicate 222.75380468504
Replicate 326.589499902388
Condition 3: 24 Hour
Replicate 122.737764346927
Replicate 221.10399373076
Replicate 324.2652828318


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110101.p1 GENE.R_Transcript_110101~~R_Transcript_110101.p1 ORF type:complete len:626 (+),score=113.06,AMP-binding|PF00501.24|1.6e+02,AMP-binding|PF00501.24|1.7e-81,AMP-binding_C|PF13193.2|6.7e-19 R_Transcript_110101:342-2219(+)
ATGACCCCATTTAAGACCCTCCACCAATTTTATACATTTAAAACTGCTCTTCTTCTGAAAAACCAATGCTCTTTCTTTCTTCCAACTCGAACCAGCTCCTCTCTCTGGACTTTTCACTCTCATTTCTTCTCAACATCAACATCGAGTTCATTAATGGAGGTGGTCAAAGCTGTTGCTAAGCAAGGTTCTGCAGCAAGTAATAGTATTGCTTTACAAGCCGATAGAAAAAGTTACAGCTATAGCCAACTCATCTTGTCTGCACAAAGGATATCTAGTCTTTTGTGTACTGGTGACACAAGAAGCACTTCAGAAGGAATTAAACATGAAGATTCTTCGGTTTTGGTTGATGGCAACAAAGCCAGTGGATCTCTTGATGGAACTCGAGTTGGAATTGTTGCTAAACCTTCATCAGAGTTTGTTGCTGGTATTCTTGGGACCTGGTTGAGTGGAGGAGTAGCTGTGCCACTAGCACTTAGTTACCCAGAGGCCGAGCTGCTGCACGTGATGAATGATTCGGATGTTTCCATGGTGTTGAGTACTGAAGATCATCAGGAGCTTATGAAAACCATTGCTTCTAAAAGTGCCGCTCAATTCTCGCTTATTCCTTCTGTTCCATGTATGACTTCAGAGTCTATTGACGGTCATTCTGAGAGCGGAGAAAGTTTGAAGCCATTCGAAAACCCAACTAAGATATCAGGGGAGGAAGCAGCATTAATCATTTATACTAGCGGAACAACTGGTAAGCCTAAAGGAGTGGTTCATACTCACAGAAGTGTGTTGGCACAGGTCCAAATGTTGACAGATGCTTGGGCGTACGCTGCTGATGATCATTTTTTGCATTGTCTACCATTGCACCATGTTCATGGGCTTTTCAACGCTCTACTTGCTCCACTATATGCAGGCGCCACAGTTGAATTTATGCCAAAATTTAGTGTCAGCGGTATCTGGCAGAGATGGCGTGAATCATACCCAAAGGACGGGAAAACAGTTGATAGTGCAGTGACCGTGTTTACTGGAGTTCCAACAATGTACACTAGATTAATACAAGGTTATGAAGCAATGGAGCCTGGTGTACAGACTGCGTCAGCCTCAGCTGCAAGCAAGTTGCGCCTCATGGTAATTGGCAATGCTCCATCATGGTTACTATTGCACAGAATGTGCGGTTCCTCTGCCCTACCTTATCCTGTTATGCAGCAGTGGGAAGCTATTACAGGTCATCGCCTTTTGGAGCGTTATGGCATGACTGAGTTTGTCATGGCAATTTCTAATCCCTTGCGAGGTTTGAGGAAAGGAGGCACAGTTGGCAAACCATTTCCTGGTGTAGAGGTCAAGATTATTTCAGAAGATACCATTGGAAATGAGACGACAGGCGTTGGCGAGCTTTGCGTTCGAAGTCCTTCACTTTTCAGGGAATACTGGAAATTGCCCGAGGTGACGAAAGAATCATTTACTGATGGTGGCTTCTTCAAGACAGGCGATGCTGTTACAGTGGATGAGGATGGTTACTACATAATTTTAGGAAGGACTAGTGCTGATATTATGAAGGTTGGTGGCTACAAGTTATCTGCATTGGAAATTGAAGCAGCTCTTCTAGAGCATCCTACGGTATCAGAATGTTGTGTATTAGGGTTGCCAGACAAAACCTACGGAGAAGCTGTATGCGCAATCATTGTGCCACAGGAGGAGGTAAAGAGGAAACGACAAGAAGAGTTAAAACCTGCTATAACCCTGGAAGAACTCCGCTTATGGGCAAAAGAGAAGCTTGCTCCATACAAGCTACCAACACAACTGTATATCTGGGAAACTCTGCCTCGTAATGCTATGGGAAAGGTCAACAAGAAAGAGCTGAAGAAATCACTGGCTGCTGAAGGGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110101.p1 GENE.R_Transcript_110101~~R_Transcript_110101.p1 ORF type:complete len:626 (+),score=113.06,AMP-binding|PF00501.24|1.6e+02,AMP-binding|PF00501.24|1.7e-81,AMP-binding_C|PF13193.2|6.7e-19 R_Transcript_110101:342-2219(+)
MTPFKTLHQFYTFKTALLLKNQCSFFLPTRTSSSLWTFHSHFFSTSTSSSLMEVVKAVAKQGSAASNSIALQADRKSYSYSQLILSAQRISSLLCTGDTRSTSEGIKHEDSSVLVDGNKASGSLDGTRVGIVAKPSSEFVAGILGTWLSGGVAVPLALSYPEAELLHVMNDSDVSMVLSTEDHQELMKTIASKSAAQFSLIPSVPCMTSESIDGHSESGESLKPFENPTKISGEEAALIIYTSGTTGKPKGVVHTHRSVLAQVQMLTDAWAYAADDHFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVSGIWQRWRESYPKDGKTVDSAVTVFTGVPTMYTRLIQGYEAMEPGVQTASASAASKLRLMVIGNAPSWLLLHRMCGSSALPYPVMQQWEAITGHRLLERYGMTEFVMAISNPLRGLRKGGTVGKPFPGVEVKIISEDTIGNETTGVGELCVRSPSLFREYWKLPEVTKESFTDGGFFKTGDAVTVDEDGYYIILGRTSADIMKVGGYKLSALEIEAALLEHPTVSECCVLGLPDKTYGEAVCAIIVPQEEVKRKRQEELKPAITLEELRLWAKEKLAPYKLPTQLYIWETLPRNAMGKVNKKELKKSLAAEGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST