Transcript Information: R_Transcript_110103.p1


Annotated TAIR IDAT3G16170.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5476490-5480128 | Forward length=544
E-Value4.8E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2961959246852
Replicate 22.2845715478873
Replicate 33.3232572678356
Condition 2: 8 Hour
Replicate 13.9329627635472
Replicate 23.7075037249634
Replicate 36.6775355131994
Condition 3: 24 Hour
Replicate 15.2339042384403
Replicate 23.8853823952312
Replicate 36.124021000479


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110103.p1 GENE.R_Transcript_110103~~R_Transcript_110103.p1 ORF type:5prime_partial len:193 (-),score=30.18,AMP-binding|PF00501.24|4.6e-40 R_Transcript_110103:37-615(-)
CTTGATGGAACTCGAGTTGGAATTGTTGCTAAACCTTCATCAGAGTTTGTTGCTGGTATTCTTGGGACCTGGTTGAGTGGAGGAGTAGCTGTGCCACTAGCACTTAGTTACCCAGAGGCCGAGCTGCTGCACGTGATGAATGATTCGGATGTTTCCATGGTGTTGAGTACTGAAGATCATCAGGAGCTTATGAAAACCATTGCTGCTAAAAGTGCTGCTCAATTCTCGCTTATTCCTTCTGTTCCATGTATGACTTCAGAGTCTATTGACGGTCATTCTGAGAGCGGAGAAAGTTTGAAGCCATTCGAAAACCCAACTAAGATATCAGGGGAGGAAGCAGCATTAATCATTTATACTAGCGGAACAACTGGTAAGCCTAAAGGAGTGGTTCATACTCACAGAAGTGTGTTGGCACAGGTCCAAATGTTGACAGATGCTTGGGCGTACGCTGCTGATGATCATTTTTTGCATTGTCTACCATTGCACCATGTTCATGGGCTTTTCAACGCTCTACTTGCTCCACTATATGCAGGCGCCACAGTAAGTATTCATAAATCATACTCTACATTCAGATCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110103.p1 GENE.R_Transcript_110103~~R_Transcript_110103.p1 ORF type:5prime_partial len:193 (-),score=30.18,AMP-binding|PF00501.24|4.6e-40 R_Transcript_110103:37-615(-)
LDGTRVGIVAKPSSEFVAGILGTWLSGGVAVPLALSYPEAELLHVMNDSDVSMVLSTEDHQELMKTIAAKSAAQFSLIPSVPCMTSESIDGHSESGESLKPFENPTKISGEEAALIIYTSGTTGKPKGVVHTHRSVLAQVQMLTDAWAYAADDHFLHCLPLHHVHGLFNALLAPLYAGATVSIHKSYSTFRS*

Click here to download the sequence:
Link to NCBI Protein BLAST