Transcript Information: R_Transcript_110148.p1


Annotated TAIR IDAT1G06820.1
Annotated Gene Namecarotenoid isomerase
Annotated Gene Symbol(s)CRTISO, CCR2
Annotation TypeOrtholog
Chromosome Positionchr1:2093145-2096220 | Reverse length=595
E-Value5.9E-259
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16096085497988
Replicate 20.59248819516891
Replicate 30.32319911952243
Condition 2: 8 Hour
Replicate 10.8636989399381
Replicate 20.98592953444381
Replicate 30.67228187482915
Condition 3: 24 Hour
Replicate 10.93126907625608
Replicate 20.62237062125086
Replicate 31.0036689979882


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110148.p1 GENE.R_Transcript_110148~~R_Transcript_110148.p1 ORF type:3prime_partial len:567 (+),score=119.41,Amino_oxidase|PF01593.20|4.4e-19,NAD_binding_8|PF13450.2|4e-12,FAD_binding_2|PF00890.20|6.1e-06,FAD_binding_2|PF00890.20|5.7,FAD_binding_2|PF00890.20|3e+02,DAO|PF01266.20|3.1e-05,DAO|PF01266.20|16,Pyr_redox_2|PF07992.10|0.00011,Pyr_redox_2|PF07992.10|15,Pyr_redox_2|PF07992.10|8.1e+02,GDI|PF00996.14|0.032,GDI|PF00996.14|0.027 R_Transcript_110148:110-1807(+)
ATGCAGTTCATCTCTACTTCCCCAATTGCTTCTCCATCTCTCAACTTCAATAATCTTGCTGTTCATCCCTTTTCTGAACAATTCAGACCAAGAAACAGTACCCAATTGGGTTTGCCTAAACCCATAAAGCAAAAACACAAGTGGGTTCTTTTTGGCTCACTGGAATTAGGGTTTTGTGACTCAAAGGGTTTAAGGCAATGTGAAAATCATAGAGTTGTTTCTAATGTAAATGGTGGGGATGATAGAAGGGATATGAGAATTGTGGGTAGGGCAGGAGCTGTGATGAGTGTAGATGAAACAGTGGGGAAAGGAAAGAGTGATGGGGAAAGTTATGATGCAATTGTCATTGGCTCTGGTATTGGTGGATTAGTTGCTGCAACTCAGCTTGCTGTTAAGGGAGCCAAGGTTTTGGTTTTGGAGAAGTATGTCATTCCTGGAGGAAGCTCTGGGTTTTACGAGAGGGATGGTTATACATTCGATGTTGGATCGTCTGTCATGTTCGGTTTCAGTGACAAGGGTAATCTGAACTTAATCACTCAAGCATTAGAGGCAGTGGGACATAGGATGCAAGTCATACCAGATCCAACCACTGTCCATTTTCACTTACCAAATAACATTTCTGTTCGAGTGCATAAGGAGTATGAGGACTTCATCGCAGAACTGACTTCTAAATTTCCCCATGAGAAAGAAGGCATTCTCAAATTTTATGGAGAGTGTTGGAAGATATTCAATGCCTTGAACTCATTGGAGCTCAAGTCACTTGAGGAACCACTCTATCTTTTTGGGCAGTTCTTTCAGAAGCCTCTTGAATGTTTGACGCTTGCGTACTATTTACCTCAAAATGCTGGAGCAATTGCTCGAAAGTATATTAAGGATCCTGAGTTATTGTCTTTCATAGATGCTGAGTGTTTCATTGTCAGCACTGTTAATGCTATGCAGACTCCTATGATCAATGCTAGTATGGTTCTATGTGATAGGCATTTTGGAGGGATCAACTATCCTATTGGCGGTGTTGGTGGGATTCCTAAATACCTTGCCCAAGGTTTGGTTGATCATGGGAGCAAAATACTTTACAAAGCTAATGTGACTAACATCATTATGGATCAAGGGAAAGCTGTTGGGGTGAAGCTGTCTGATGGAAGGAAATTTTATGCCAGAACCATCATATCAAATGCAACTAGATGGGATACTTTTGGAAAGCTTTTGAAAGATGAGAAGCTCCCGAAAGAAGAGGAAAATTTTCAGAAATTATATGTCAAGGCTCCATCCTTTCTTTCTATACACATGGGGGTCAAAGCTGAGGTCTTGCCGCCAGATACAGATTGCCACCATTTTATTCTGGAGACTGACTGGAATAATTTAGAAGAGCCTTATGGTAGTATATTTTTGAGCATTCCCACCGTACTTGATTCTTCATTGGCCCCTGAAGGACACCATATTCTCCACATATTTACAACGTTTGCTATTGATGACTGGCAGGTTAGGACTCCAAAAATACACATGCGTTACTTGGCTCGTGATAATGGGACATACGGACCTATGCCGCGTGCAGTCTCAAAAGGCTTACTGGGGATGCCATTCAATACTACGGCTATAGATGGTCTCTACTGTGTTGGTGATAGCTGTTTTCCAGGACAAGGGGTCATAGCTGTGGCGTTTTCTGGAGTAATGTGTGCTCATCGGGTGGCTGCTGACATC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110148.p1 GENE.R_Transcript_110148~~R_Transcript_110148.p1 ORF type:3prime_partial len:567 (+),score=119.41,Amino_oxidase|PF01593.20|4.4e-19,NAD_binding_8|PF13450.2|4e-12,FAD_binding_2|PF00890.20|6.1e-06,FAD_binding_2|PF00890.20|5.7,FAD_binding_2|PF00890.20|3e+02,DAO|PF01266.20|3.1e-05,DAO|PF01266.20|16,Pyr_redox_2|PF07992.10|0.00011,Pyr_redox_2|PF07992.10|15,Pyr_redox_2|PF07992.10|8.1e+02,GDI|PF00996.14|0.032,GDI|PF00996.14|0.027 R_Transcript_110148:110-1807(+)
MQFISTSPIASPSLNFNNLAVHPFSEQFRPRNSTQLGLPKPIKQKHKWVLFGSLELGFCDSKGLRQCENHRVVSNVNGGDDRRDMRIVGRAGAVMSVDETVGKGKSDGESYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGFYERDGYTFDVGSSVMFGFSDKGNLNLITQALEAVGHRMQVIPDPTTVHFHLPNNISVRVHKEYEDFIAELTSKFPHEKEGILKFYGECWKIFNALNSLELKSLEEPLYLFGQFFQKPLECLTLAYYLPQNAGAIARKYIKDPELLSFIDAECFIVSTVNAMQTPMINASMVLCDRHFGGINYPIGGVGGIPKYLAQGLVDHGSKILYKANVTNIIMDQGKAVGVKLSDGRKFYARTIISNATRWDTFGKLLKDEKLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFILETDWNNLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTTFAIDDWQVRTPKIHMRYLARDNGTYGPMPRAVSKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADI

Click here to download the sequence:
Link to NCBI Protein BLAST