Transcript Information: R_Transcript_110202.p1


Annotated TAIR IDAT5G63970.1
Annotated Gene NameCopine (Calcium-dependent phospholipid-binding protein) family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25607006-25608916 | Reverse length=367
E-Value5.6E-179
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 153.276408877986
Replicate 237.8359728314
Replicate 345.987891976032
Condition 2: 8 Hour
Replicate 135.983035036688
Replicate 241.032785713648
Replicate 345.563306861834
Condition 3: 24 Hour
Replicate 143.176992781037
Replicate 239.072514481276
Replicate 350.608373019704


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110202.p1 GENE.R_Transcript_110202~~R_Transcript_110202.p1 ORF type:complete len:394 (+),score=52.71,Copine|PF07002.12|7.4e-72,zf-C3HC4_3|PF13920.2|8.2e-11 R_Transcript_110202:386-1567(+)
ATGAACCCTAGTCATGCTCACAAAGGCAAGCAGCTGCCGAAATTTATAGGTGACAATTTCTGTTCAGTCGATCAGGTTACAGAAGCTCTCAGGGAAGCTGGCCTTGAATCGTCGAACCTAATTCTTGGCATTGACTTCACAAAGAGCAATGAATGGATGGGGAAGTATTCATTTAATAGGAGAAGTTTGCATGCAATTGGTCGTGATCCAAATCCTTATGAGCAAGCTATTTCTATAATTGGCCGAACTTTATCACCATTTGACGAAGACAACCTGATACCTTGTTTTGGATTTGGTGATGTAACAACGCGTGACAAGCATGTTTTTAGCTTCTATGCTGATCACCGGCCTTGCGATGGTTTTGAGGAAGCACTTGTGCGATACAAAGAAATTGTTCCCCGTATCAACTTATCAGGCCCTACATCATTCGCCCCTGTAATAGATGCAGCGATTGACATAGTGGAAAGTAACAACAGACAATATCATGTTCTAGTCATCATAGCAGATGGACAGGTCACTAGGCCCCCTGGTTTACCACCTGGAATGCTTAGTCAACAAGAACAAGAAACAGTAAATTCTATTGTAGCTGCCAGCCACTGTCCACTTTCCATTGTTTTGGTTGGTGTGGGAGATGGACCCTGGGACGCCATGCACAAGTTTGATGATAATATTCCCCAGCGTGCATTTGATAATTTCCAGTTCGTCAATTTCACAAAAATTATGTCCGAGAACAGGAGTATGTCGAAGAAAGAGGCAGCTTTTGCTCTTGCTGCATTGATGGAAATCCCGTTACAGTACAGAGCGACCCAAACCCCCGAATTTATCAAAAAAAAAGTGAGCCACTTTCATAGTAAGCCTCTTCCTCCTCCACGTGAAGTGATAGCTTATGATAATTCTAAAAGATCTGCCGCACACATGACAAGTTCATCCTCTATAGAAGTGATGGATTATGATAATTCTAAGAGATCTGTTGCACACACGACACGTTCATCCTCTGTAGAACCGCCTGCTCCAATAGAAGCCAATGCTTCTGTAGACCAGGTATGTCCAATTTGCTTGACAAATCCGAAGAACATGGCATTTGGTTGTGGTCATCTGACTTGCAAGGATTGTGGAGAAACACTGCCAGCATGTCCTCTGTGTCGGAAGCCCATTACTACACGCGTCAAATTGTATATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110202.p1 GENE.R_Transcript_110202~~R_Transcript_110202.p1 ORF type:complete len:394 (+),score=52.71,Copine|PF07002.12|7.4e-72,zf-C3HC4_3|PF13920.2|8.2e-11 R_Transcript_110202:386-1567(+)
MNPSHAHKGKQLPKFIGDNFCSVDQVTEALREAGLESSNLILGIDFTKSNEWMGKYSFNRRSLHAIGRDPNPYEQAISIIGRTLSPFDEDNLIPCFGFGDVTTRDKHVFSFYADHRPCDGFEEALVRYKEIVPRINLSGPTSFAPVIDAAIDIVESNNRQYHVLVIIADGQVTRPPGLPPGMLSQQEQETVNSIVAASHCPLSIVLVGVGDGPWDAMHKFDDNIPQRAFDNFQFVNFTKIMSENRSMSKKEAAFALAALMEIPLQYRATQTPEFIKKKVSHFHSKPLPPPREVIAYDNSKRSAAHMTSSSSIEVMDYDNSKRSVAHTTRSSSVEPPAPIEANASVDQVCPICLTNPKNMAFGCGHLTCKDCGETLPACPLCRKPITTRVKLYI*

Click here to download the sequence:
Link to NCBI Protein BLAST