Transcript Information: R_Transcript_110206.p1


Annotated TAIR IDAT5G63970.1
Annotated Gene NameCopine (Calcium-dependent phospholipid-binding protein) family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25607006-25608916 | Reverse length=367
E-Value2.9E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2637506761501
Replicate 22.7019367827944
Replicate 33.8075542385025
Condition 2: 8 Hour
Replicate 12.9540587737963
Replicate 22.8175910094792
Replicate 35.3530218987736
Condition 3: 24 Hour
Replicate 16.5857516712181
Replicate 23.0155984005883
Replicate 33.8142112725156


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110206.p1 GENE.R_Transcript_110206~~R_Transcript_110206.p1 ORF type:complete len:373 (+),score=53.61,Copine|PF07002.12|6.4e-72 R_Transcript_110206:362-1480(+)
ATGAACCCTAGTCATACTCACAAAATCAAGCAGCTGCCGAAATTTATAGGTGACAATTTCTGTTCAGTCGATCAGGTTACAGAAGCTCTCAGGGAAGCTGGCCTTGAATCGTCGAACCTAATTCTTGGCATTGACTTCACAAAGAGCAATGAATGGATGGGGAAGTATTCATTTAATAGGAGAAGTTTGCATGCAATTGGTCGTGATCCAAATCCTTATGAGCAAGCTATTTCTATAATTGGCCGAACTTTATCACCATTTGACGAAGACAACCTGATACCTTGTTTTGGATTTGGTGATGTAACAACGCGTGACAAGCATGTTTTTAGCTTCTATGCTGATCACCGGCCTTGCGATGGTTTTGAGGAAGCACTTGTGCGATACAAAGAAATTGTTCCCCGTATCAACTTATCAGGCCCTACATCATTCGCCCCTGTAATAGATGCAGCGATTGACATAGTGGAAAGTAACAACAGACAATATCATGTTCTAGTCATCATAGCAGATGGACAGGTCACTAGGCCCCCTGGTTTACCACCTGGAATGCTTAGTCAACAAGAACAAGAAACAGTAAATTCTATTGTAGCTGCCAGCCACTGTCCACTTTCCATTGTTTTGGTTGGTGTGGGAGATGGACCCTGGGACGCCATGCACAAGTTTGATGATAATATTCCCCAGCGTGCATTTGATAATTTCCAGTTCGTCAATTTCACAAAAATTATGTCCGAGAACAGGAGTATGTCGAAGAAAGAGGCAGCTTTTGCTCTTGCTGCATTGATGGAAATCCCGTTACAGTACAGAGCGACCCAAACCCCCGAATTTATCAAAAAAAAAGTGAGCCACTTTCATAGTAAGCCTCTTCCTCCTCCACGTGAAGTGATAGCTTATGATAATTCTAAAAGATCTGCCGCACACATGACAAGTTCATCCTCTATAGAAGTGATGGATTATGATAATTCTAAGAGATCTGTTGCACACACGACACGTTCATCCTCTGTAGAACCGCCTGCTCCAATAGAAGCCAATGCTTCTGTAGACCAGGTAAGGCTGTATATCTTTGATCCTCTCCATCTGAGGTCAATCCTTCCAACAACTGGAATTGTGGTTCTTACTCCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110206.p1 GENE.R_Transcript_110206~~R_Transcript_110206.p1 ORF type:complete len:373 (+),score=53.61,Copine|PF07002.12|6.4e-72 R_Transcript_110206:362-1480(+)
MNPSHTHKIKQLPKFIGDNFCSVDQVTEALREAGLESSNLILGIDFTKSNEWMGKYSFNRRSLHAIGRDPNPYEQAISIIGRTLSPFDEDNLIPCFGFGDVTTRDKHVFSFYADHRPCDGFEEALVRYKEIVPRINLSGPTSFAPVIDAAIDIVESNNRQYHVLVIIADGQVTRPPGLPPGMLSQQEQETVNSIVAASHCPLSIVLVGVGDGPWDAMHKFDDNIPQRAFDNFQFVNFTKIMSENRSMSKKEAAFALAALMEIPLQYRATQTPEFIKKKVSHFHSKPLPPPREVIAYDNSKRSAAHMTSSSSIEVMDYDNSKRSVAHTTRSSSVEPPAPIEANASVDQVRLYIFDPLHLRSILPTTGIVVLTP*

Click here to download the sequence:
Link to NCBI Protein BLAST