Transcript Information: R_Transcript_110354.p1


Annotated TAIR IDAT5G18550.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6160515-6162729 | Forward length=465
E-Value1E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4708242728818
Replicate 23.9583189309414
Replicate 37.3695856610572
Condition 2: 8 Hour
Replicate 16.0712902840505
Replicate 26.415007085586
Replicate 38.25749499534
Condition 3: 24 Hour
Replicate 18.3269095887369
Replicate 26.0109619517352
Replicate 37.3557040341212


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110354.p1 GENE.R_Transcript_110354~~R_Transcript_110354.p1 ORF type:complete len:488 (+),score=60.79,zf-CCCH|PF00642.20|3.8e-10,zf-CCCH|PF00642.20|4.1e-10,zf-CCCH|PF00642.20|3.3e-08,zf-CCCH|PF00642.20|1.4e-08,zf-CCCH|PF00642.20|3.7e-08,Torus|PF16131.1|0.71,Torus|PF16131.1|0.17,Torus|PF16131.1|3.6,Torus|PF16131.1|3.5,Torus|PF16131.1|0.12 R_Transcript_110354:356-1819(+)
ATGGACCGGTACGGTTCGAATGAGGGTACCCAATCGGATCGGAACCAGGATTGGGAACCATCCGCTGCCCAAACCGGCCTCGAAGAATCCATGTGGCAGCTGGGATTAGGTTCCGGGTCGGGTGAGCCCTATCCGGAGCGGCCCGGCGAGCCTGATTGCATTTACTTTCTCAGGACTGGCTCTTGTGGTTATGGCGATCGTTGCCGTTTCAATCATCCCCGTCATCGTCCCCCGGTGACAGTCGGAGGCGGGAGGGTTGGTGGAGTAGAGTTGCCGGAGCGAGCTGGGCAACCAGTTTGTCAGTATTATATGAAGACTGGGACTTGTAAATTTGGTTCTTCTTGCAAGTATCATCATCCAAGACAAGGAACTGGTTCAGTGACCCCATTTGCACTCAACATTTATGGATATCCCCTATGTCCGGGTGAGAAAGAGTGTTCTTACTACTTGAAAACAGGGCAGTGCAAGTTTGGGATGACCTGCAAATTCCACCATCCACAGCCTGCTAATGTACAACAATTGCCTACACCGACCCCTGCAGCAGCTATTCCTCCTGCTCCTGTAGCTTCACCTACTGCATATCCTCCTATTCAGAATGCTCCTGATGCTCCTACCCCTGGTCCTCAGCAATATGGAATGGTGCCAGGCAACTGGCCTTTCGTAAGGCCTCCTATGGTACCCGGTTCATATATCCAAGGACCGTATGGACCAATGCTATTGTCTCCTGGGTTAGTTCCGTTTCCTGGTTGGGCACCTTATCCGGTACCTAATCCTGTTACTACACCAACTACTCAGTCACCAGCTGGAGCTGGTCAACTTTATGGCTTAACACCGCTATCACCATCTGCATCTGCTTATACTGGGCCATATGGCCCATATCCGGTTATGTCTTCTTCTGCGGGTCCTTCAAGTACTATATGCCGGGAGCAATCATTTCCACAGAGACCAGGGCAACCAGAGTGCCAGTATTACCTTAAAACAGGGGACTGTAAATTTGGTACATCATGTAAATACCATCATCCTGCTGAATGGGTTGTTCCAGAAACAAGTTCTGTTCTTAGTCCCATGGGTCTTCCTCTTCGCCCGGGTACTCCAACCTGCAGTTACTATGCACAACATGGAGTATGCAAGTTTGGTCCAACATGCAAGTATGATCATCCATTGGGAACACTGAGTTACAGTCCATCAGCATCATCCCTCTCGGATATGCCAGTGGCCCCCTATCCTGTGGGATCCTCAATCGGAACTCTTGCCCCATCATCTTCGTCCTCAGATTTACGAACTGATGTAATATCGGGATCCAACAAAGATTATTCTTCCGTTTTGCTATCTTCCTCTAGCAACATATCAGGCGGTTCTATTTTGTCAAAGAGTAGGTCCATTTTCCAATCTGGAGCCCAACAGTCGAGTCCTTCAACCAGCAGCTCTGATAGTGCTGCTGGTCATGCAGGTGCTCCAAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110354.p1 GENE.R_Transcript_110354~~R_Transcript_110354.p1 ORF type:complete len:488 (+),score=60.79,zf-CCCH|PF00642.20|3.8e-10,zf-CCCH|PF00642.20|4.1e-10,zf-CCCH|PF00642.20|3.3e-08,zf-CCCH|PF00642.20|1.4e-08,zf-CCCH|PF00642.20|3.7e-08,Torus|PF16131.1|0.71,Torus|PF16131.1|0.17,Torus|PF16131.1|3.6,Torus|PF16131.1|3.5,Torus|PF16131.1|0.12 R_Transcript_110354:356-1819(+)
MDRYGSNEGTQSDRNQDWEPSAAQTGLEESMWQLGLGSGSGEPYPERPGEPDCIYFLRTGSCGYGDRCRFNHPRHRPPVTVGGGRVGGVELPERAGQPVCQYYMKTGTCKFGSSCKYHHPRQGTGSVTPFALNIYGYPLCPGEKECSYYLKTGQCKFGMTCKFHHPQPANVQQLPTPTPAAAIPPAPVASPTAYPPIQNAPDAPTPGPQQYGMVPGNWPFVRPPMVPGSYIQGPYGPMLLSPGLVPFPGWAPYPVPNPVTTPTTQSPAGAGQLYGLTPLSPSASAYTGPYGPYPVMSSSAGPSSTICREQSFPQRPGQPECQYYLKTGDCKFGTSCKYHHPAEWVVPETSSVLSPMGLPLRPGTPTCSYYAQHGVCKFGPTCKYDHPLGTLSYSPSASSLSDMPVAPYPVGSSIGTLAPSSSSSDLRTDVISGSNKDYSSVLLSSSSNISGGSILSKSRSIFQSGAQQSSPSTSSSDSAAGHAGAPS*

Click here to download the sequence:
Link to NCBI Protein BLAST