Transcript Information: R_Transcript_110380.p1


Annotated TAIR IDAT1G05760.1
Annotated Gene NameMannose-binding lectin superfamily protein
Annotated Gene Symbol(s)RTM1
Annotation TypeHomolog
Chromosome Positionchr1:1723797-1724440 | Reverse length=174
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.861856151788
Replicate 246.431818634899
Replicate 342.279292820327
Condition 2: 8 Hour
Replicate 143.934637676771
Replicate 254.049445821837
Replicate 341.69684268226
Condition 3: 24 Hour
Replicate 140.799303130377
Replicate 239.069315749023
Replicate 345.901643543379


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110380.p1 GENE.R_Transcript_110380~~R_Transcript_110380.p1 ORF type:complete len:175 (+),score=8.76,Jacalin|PF01419.13|3.9e-10 R_Transcript_110380:16-540(+)
ATGACTAAATTACCCTCTATGGTATACATTTCCTACCTAGTAATAAGCTCATTACTCACTTCCTATGAGGACAATTTTGTCACTTTAGCTCATTCCTTAATTTTAACTCCAAGACTTTCATGTTACTTATCAGTTAAAGAAGACATCATTCCATTCCAAGTGACATGGCTTTTTTGTTTAAAGTTTTCAATGATTAAAAGTTATGTAAGTGTGAAAATAACTTTGCAGGTGACATTCAGCGACATCAGCGAATACATCACCAGGGTGAATGGTAGCATTGGCTACAGCAACCAGCTCCGAGCTTTGAGCTCCATAACAATTGAAACAAACAAAAGAAGCTATGGACCTTTCGGAAGCTCTGAGAAGAGTGACACTAATTTTAGCTATCAGTTCGGACCAGGCAATCAGTTTGGTGGTTTTTATGGCACTTTCCAGTTTGCTCGGCCTATTCCTATGCTCTCCTCCATTGGAGTCTATGTAAAGCCCTCTATTGATTTGGATAATTTCCTGTCCCCTTCACCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110380.p1 GENE.R_Transcript_110380~~R_Transcript_110380.p1 ORF type:complete len:175 (+),score=8.76,Jacalin|PF01419.13|3.9e-10 R_Transcript_110380:16-540(+)
MTKLPSMVYISYLVISSLLTSYEDNFVTLAHSLILTPRLSCYLSVKEDIIPFQVTWLFCLKFSMIKSYVSVKITLQVTFSDISEYITRVNGSIGYSNQLRALSSITIETNKRSYGPFGSSEKSDTNFSYQFGPGNQFGGFYGTFQFARPIPMLSSIGVYVKPSIDLDNFLSPSP*

Click here to download the sequence:
Link to NCBI Protein BLAST