Transcript Information: R_Transcript_110442.p1


Annotated TAIR IDAT5G47940.1
Annotated Gene Nameunknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19409407-19411893 | Reverse length=749
E-Value5.4E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0761213420353
Replicate 23.4006277974863
Replicate 33.7662611507784
Condition 2: 8 Hour
Replicate 13.2147086495156
Replicate 23.4844564341479
Replicate 34.1203042512535
Condition 3: 24 Hour
Replicate 13.380290634754
Replicate 22.8685367391426
Replicate 33.9209875880822


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110442.p1 GENE.R_Transcript_110442~~R_Transcript_110442.p1 ORF type:complete len:815 (+),score=178.37,DUF4506|PF14958.2|0.00056,DUF4506|PF14958.2|34,DUF4506|PF14958.2|4e+03 R_Transcript_110442:166-2610(+)
ATGGCAACCGAAAACCTAAACCCTTCACTGAAATCGCCGGTAACAAAATCCTCATCTTGGCCAATCGTTCGCGGTTCCGTCGACGATGCTGTCACCTTTGAATCTTCCATCGACGTTGATAATGATGAAGATCTTGATACTCAAGATTATCAAAATGATAATGATGATCAAGTAGTCTCTAAGCCTAATCTTAAACCCCCTCTTGTCCTGCGCCGTCCCTCACCTGATTCTGCCCCTTGCGAGATCACTATTGTTTTCAAACAACTTCATGAAATCAGGCAGTTCTATGTACGAAGTACTGCTAGAGTCTACGAGATATACTATGCAACTAATGATAAGGGTGATGATGAGTATTTATGTACTGTTCGCTGTGGGGTGGCTGTAAAAAATGAAGATCTCCAAGAGGATGATGCTATAGGATCTTTGTCTGCCAGTTGTAGTGGCTCCAACAGATGTGTGGAGGAAGGGCATTCCAAAACTGAAAGTGGAAGCAGCACTAGTGAAGATGGGGGGGTGGACGTGAAAGTCTCTGATTCCTCTGGGCTTTATCATAGAGATCAAATTCTGCCAAAGGAGGAGGAGGGATTCATGGAACAAGGTGATCAGGATTTTTTTGAGGCTACTGCAGAGATTTCTGATGCTGATACAGTCCTGTCTGTTACTCTTCGCTTGCTATCTATTCAAAGTGGAGATTACATATATATTGATGAAATCTATGTGTTCGCTGATCCTGTTGTTTTATCAGCTGATACGGACTCTTCAGAAAAGACTCTTGGGAACTCATCTGGTAGTGCTTTGATGTCAATGCTCGTTCCTACACTTCTTCAGATGTCGAAATCTCGAGTGAACCAAATCCAAAAACATAATCATTCTGCTGCAGGAGAAAGAATAAAGCACCAAAATCCTGAGCACGAGTCAACTGGTGCACCCACTCATTCTAACGCATTTTGCTTGGAAGGAAAGGAAAGCACCCTGGCTAATGGGGAATCTTTAAACATGTCAGAATCAGAGGTTCCTTTACAAACACCAGATCCCCAAAGAGTTCCTTACTCTAGTAATAGAGATATTCCTTGCAGTCACATGCAGAGGTCACTGGATGAACTTATTTCTCGAGTGGCTAGAATTGAACACTTCTGTTTAAGATTTGAGGAAAACTTGCTAAAGCCAATTACGAGTATGGAAGCAAGGCTCGAAAGGGTAGAACAACAACTGGAATCATTTGTCAAAACCTCCCAATTTTCAACCACAGCAGGCTATAGGATTTCTGCTCCTGACTTCTCATGCAATGATACTGAATTTAATAACATTTGCACTGACGGAAATGATTATCTTGGAACCAGATTGGTTGATAATAATATTCATCATGAAGAAAATCATGAAGAACTACCAAGCCCACCGTCAAATGTGTCTTTATCTGCTAATAATCATGTTCGATGCCTTGATTTGCCTTCATCCACCTGTGTGTCTCAGTCGCTTCCAAGCCTAGTCGTCACTGCACCTGACTTTTTAAATGTAGACGATGAGGAAGAGAATGACACTGCTGAAGCAGTAAATGACTTGCAGAATGATAGCCCAAAGAAATCGTTGTCAATCGATGATGCTTTAGCATCTGCCCTTTCTGGTTTTTTGTTGTCAACTTCAACTAATTCAACAAAATGTATTGATAAGGTTGAGGAAGAAGATGCAGATCATCCTCCTTTTGTAAAAGGAAGCAGTAACGTATTGCTGCTCCAATCTGATGAACCTCAACTCCCGTCAGAACCTATCAATGTAGATAGCGAAGCTGCTGGCATTTCCTGCAAGGCTTTGGTTGTATCAAAGCAAGAGTCTCCCACTGTAGATAACTGTTCTAAGGAAATAGTTGAAGCTGTTGACAAACAAGACCATGATTTTGAAGAAGAGGTCAATAAACAACACGAGAGATCCTCTGTTGATAATGTATCTTGTCTTGACAGAGGTGGAAGGGAAGATAGTGGTCTCATTGCAGAAATCAGGTCCAACTGGTTTGAGGATAACCTGAATCAAACTTTTGTTTCTTGTTACTCTGACAGTAGCAAGGAGGGTGCTGTAGATAACTCTGATGTACTGCAGAACATTCTCAAGTTACCTAGCCCTAGAACGATGGATTTTGAAATTCCCATACTGGATGTAAAGTTCTTGTCACTGGAGGATTCCTCTGCAAAGTCTCCTCTAGAAGCCCTTCTAATTGATATGCCTGAATTCCAGAGTGATGTTCTGTGTTTGAAAGAAAACAATGAATGTTCTTTGAGCGAGCAAAATGGTTTACTTATGATTGAGAATGAAGAATCAACAATTTCGGAAGCTAACAATGATCAGTTCTGTTTGGATAGTTGTGCCTCTGGCTGCATGCCTCTAAATACAGAGAAAGAACTCTATGATCCTCTTGAATTTAGCAGCCAAGATATGTCTGCAAGTCTGATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110442.p1 GENE.R_Transcript_110442~~R_Transcript_110442.p1 ORF type:complete len:815 (+),score=178.37,DUF4506|PF14958.2|0.00056,DUF4506|PF14958.2|34,DUF4506|PF14958.2|4e+03 R_Transcript_110442:166-2610(+)
MATENLNPSLKSPVTKSSSWPIVRGSVDDAVTFESSIDVDNDEDLDTQDYQNDNDDQVVSKPNLKPPLVLRRPSPDSAPCEITIVFKQLHEIRQFYVRSTARVYEIYYATNDKGDDEYLCTVRCGVAVKNEDLQEDDAIGSLSASCSGSNRCVEEGHSKTESGSSTSEDGGVDVKVSDSSGLYHRDQILPKEEEGFMEQGDQDFFEATAEISDADTVLSVTLRLLSIQSGDYIYIDEIYVFADPVVLSADTDSSEKTLGNSSGSALMSMLVPTLLQMSKSRVNQIQKHNHSAAGERIKHQNPEHESTGAPTHSNAFCLEGKESTLANGESLNMSESEVPLQTPDPQRVPYSSNRDIPCSHMQRSLDELISRVARIEHFCLRFEENLLKPITSMEARLERVEQQLESFVKTSQFSTTAGYRISAPDFSCNDTEFNNICTDGNDYLGTRLVDNNIHHEENHEELPSPPSNVSLSANNHVRCLDLPSSTCVSQSLPSLVVTAPDFLNVDDEEENDTAEAVNDLQNDSPKKSLSIDDALASALSGFLLSTSTNSTKCIDKVEEEDADHPPFVKGSSNVLLLQSDEPQLPSEPINVDSEAAGISCKALVVSKQESPTVDNCSKEIVEAVDKQDHDFEEEVNKQHERSSVDNVSCLDRGGREDSGLIAEIRSNWFEDNLNQTFVSCYSDSSKEGAVDNSDVLQNILKLPSPRTMDFEIPILDVKFLSLEDSSAKSPLEALLIDMPEFQSDVLCLKENNECSLSEQNGLLMIENEESTISEANNDQFCLDSCASGCMPLNTEKELYDPLEFSSQDMSASLI*

Click here to download the sequence:
Link to NCBI Protein BLAST