Transcript Information: R_Transcript_110514.p1


Annotated TAIR IDAT5G53110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21529022-21533008 | Forward length=382
E-Value7E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5569872629708
Replicate 22.2611400448321
Replicate 32.7018203318539
Condition 2: 8 Hour
Replicate 11.381253920101
Replicate 22.2934237785831
Replicate 33.4441517587401
Condition 3: 24 Hour
Replicate 12.7078439294215
Replicate 22.4882856184241
Replicate 32.4693820672397


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110514.p1 GENE.R_Transcript_110514~~R_Transcript_110514.p1 ORF type:complete len:195 (+),score=10.43 R_Transcript_110514:110-694(+)
ATGCATTGCTTCAAACAATCCAATCTTTTCCTTCTAATAATCATCCTGGTTTCATTAAGATACACCATATGCTATCATGATAAAGGCATAGGGGAGACCAGCACATGCCTTACACAAGTGTGTAGGTATGATGAACCTGCCTTTCGATATGTTCGATTCCCATTCCTGATCAAGAATGAATCCCTCCCAAACACAAACACTTGCGGGTATCCAGGTTTCGACTTGTTCTGTAATCAAGCTGATAAGCTCTTAGTTGACTTGCCTGATTCAGGGGTTTTCTCTGTAAAAGCCTTAGATTATGGTAACCAGGAGTTATGGCTCAATGATCCCGATAATTGCCTCGCGAAAAGGTTTCTTTCGTTGAATCTATCAAGTAGTACTAGTACTAGCAGTTCCCCTTTCGTTCCCATCCGAGAGCGAGTTTATTGGTTGTATAATTGTTCTAATGATTATTTGAAGTCACTTGCTTATGTGAAGCCAATTAAGTGCCTTAGTGGTGCAAGTTATGGTGTTGTTGCTACTTCTTCTCAATCTCAGATAGTAGGTGTTGGGTTTTCCCACATCGGTTGTGGAAGGGGCTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110514.p1 GENE.R_Transcript_110514~~R_Transcript_110514.p1 ORF type:complete len:195 (+),score=10.43 R_Transcript_110514:110-694(+)
MHCFKQSNLFLLIIILVSLRYTICYHDKGIGETSTCLTQVCRYDEPAFRYVRFPFLIKNESLPNTNTCGYPGFDLFCNQADKLLVDLPDSGVFSVKALDYGNQELWLNDPDNCLAKRFLSLNLSSSTSTSSSPFVPIRERVYWLYNCSNDYLKSLAYVKPIKCLSGASYGVVATSSQSQIVGVGFSHIGCGRGW*

Click here to download the sequence:
Link to NCBI Protein BLAST