Transcript Information: R_Transcript_110517.p1


Annotated TAIR IDAT5G53110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21529022-21533008 | Forward length=382
E-Value4E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4260125745874
Replicate 20.065613438800932
Replicate 30.64425199489179
Condition 2: 8 Hour
Replicate 10.76518327960141
Replicate 20.34938877876852
Replicate 30.96430431420806
Condition 3: 24 Hour
Replicate 10.8609177710389
Replicate 20.48245878823138
Replicate 31.3679815429311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110517.p1 GENE.R_Transcript_110517~~R_Transcript_110517.p1 ORF type:complete len:320 (+),score=18.07,WAK_assoc|PF14380.2|1.3e-07 R_Transcript_110517:110-1069(+)
ATGCATTGCTTCAAACAATCCAATCTTTTCCTTCTAATAATCATCCTGGTTTCATTAAGATACACCATATGCTATCATGATAAAGGCATAGGGGAGACCAGCACATGCCTTACACAAGTGTGTAGGTATGATGAACCTGCCTTTCGATATGTTCGATTCCCATTCCTGATCAAGAATGAATCCCTCCCAAACACAAACACTTGCGGGTATCCAGGTTTCGACTTGTTCTGTAATCAAGCTGATAAGCTCTTAGTTGACTTGCCTGATTCAGGGGTTTTCTCTGTAAAAGCCTTAGATTATGGTAACCAGGAGTTATGGCTCAATGATCCCGATAATTGCCTCGCGAAAAGGTTTCTTTCGTTGAATCTATCAAGTAGTTCTAGTTCTAGCAGTTCCCCTTTCGTTCCCTTCCGAGAGCGAGTTTATTGGTTGTATAATTGTTCTAATGATTATTTGAAGTCACTTGCTTATGTGAAGCCAATTAAGTGCCTTAGTGGTGCAAGTTATGGTGTTGTTGCTACTTCTTCTCAATCTCAGATAATAGGCAATAGCAATTTTTCCTCCCAGTGTGATGAATTAGGGCCTGTTCGAGTTCCTATTGGATCGAAATCAGAGAAGACGTACTCTTCAGATCTTAGTAGTGATATAAGCCTCACTTGGGTTCAACCTGATTGTGGAGAGTGCTTTCAGAAAGGAGGGCAGTGTGGATTCAAGAGCAGTTCACGCTTGGAAATCGGATGCTTTGATGTTCCTCGCCATGGTAACTACTCATGCTTATCGGCTTTCTCATCTTTTCTATATAGCACAGACGAGTTTCGTAAATATTTGCACAAGCTAGGTTGCTGCATAGTTGTGTTATTTTTGGCCATTCCATCGTATGTTACTTTTCGGAATGTTGGGATTTTATGGATCTTCGTACTTGTTTTTGTTCAAGTACATCATTTGAATTTGCCAATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110517.p1 GENE.R_Transcript_110517~~R_Transcript_110517.p1 ORF type:complete len:320 (+),score=18.07,WAK_assoc|PF14380.2|1.3e-07 R_Transcript_110517:110-1069(+)
MHCFKQSNLFLLIIILVSLRYTICYHDKGIGETSTCLTQVCRYDEPAFRYVRFPFLIKNESLPNTNTCGYPGFDLFCNQADKLLVDLPDSGVFSVKALDYGNQELWLNDPDNCLAKRFLSLNLSSSSSSSSSPFVPFRERVYWLYNCSNDYLKSLAYVKPIKCLSGASYGVVATSSQSQIIGNSNFSSQCDELGPVRVPIGSKSEKTYSSDLSSDISLTWVQPDCGECFQKGGQCGFKSSSRLEIGCFDVPRHGNYSCLSAFSSFLYSTDEFRKYLHKLGCCIVVLFLAIPSYVTFRNVGILWIFVLVFVQVHHLNLPI*

Click here to download the sequence:
Link to NCBI Protein BLAST