Transcript Information: R_Transcript_110548.p2


Annotated TAIR IDAT5G45480.1
Annotated Gene NameProtein of unknown function (DUF594)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18426296-18428929 | Reverse length=877
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.553443485508
Replicate 21.4518718372972
Replicate 32.1931982804827
Condition 2: 8 Hour
Replicate 14.2980507620164
Replicate 22.9735215214342
Replicate 33.9585959331695
Condition 3: 24 Hour
Replicate 12.0759719301647
Replicate 20.35194562059432
Replicate 31.7463594165078


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110548.p2 GENE.R_Transcript_110548~~R_Transcript_110548.p2 ORF type:3prime_partial len:188 (+),score=35.65,DUF594|PF04578.9|2.1e-17 R_Transcript_110548:2068-2628(+)
ATGATACCTGGGAGTGCACGTACAACCGAGTGTATGTTTGACCAGGTAGTAAGAGAACTTAAAAACCATAGATCAAGTGCGAATGATCATGGTCATGACATGGCGGTCGTGGAAGAAACACAAGAAGAGATGGACGACCTTGAGGAGGAAAAGCTCAGTGGAGAAACAGAGGAGCCCATTTTGAGGAAAGCACGACAACTTAAGGAAGACCTTAAAAATGAAGATTATGATAATGCTCGTCTTTGGAAAATTTTAGCAGAATTTTGGACAGAAATGTTGTTATTTTTGGCACTTTGTTCAGATCACAAGGATGTATTGGAGACACACGCGAATGGCTTATCAGTAGGTGGGGAGTTCATGACACATCTTTGGGCGTTGGTTAAACACAAAGGATGTCAATTGCAAGTTACTGAGTGTGAAGTTAGTGGTAAATCTGATGGCTGCAATGAAGCCCAAGACAATTATGAAGATAATGACACTTCCTCTATGCCTATCTCTAAGGGTGTTGACGCCATATCAAAAGTTGTTCAAGTTATTCCTTTTGATGATCTCTTTTACGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110548.p2 GENE.R_Transcript_110548~~R_Transcript_110548.p2 ORF type:3prime_partial len:188 (+),score=35.65,DUF594|PF04578.9|2.1e-17 R_Transcript_110548:2068-2628(+)
MIPGSARTTECMFDQVVRELKNHRSSANDHGHDMAVVEETQEEMDDLEEEKLSGETEEPILRKARQLKEDLKNEDYDNARLWKILAEFWTEMLLFLALCSDHKDVLETHANGLSVGGEFMTHLWALVKHKGCQLQVTECEVSGKSDGCNEAQDNYEDNDTSSMPISKGVDAISKVVQVIPFDDLFYD

Click here to download the sequence:
Link to NCBI Protein BLAST