Transcript Information: R_Transcript_110868.p1


Annotated TAIR IDAT5G61930.1
Annotated Gene NameArabidopsis thaliana protein of unknown function (DUF794)
Annotated Gene Symbol(s)APO3
Annotation TypeOrtholog
Chromosome Positionchr5:24866230-24867665 | Reverse length=402
E-Value1.2E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4364812134127
Replicate 20.99756178448475
Replicate 31.1401543599895
Condition 2: 8 Hour
Replicate 11.7173344193769
Replicate 21.2141655298381
Replicate 31.6426796941527
Condition 3: 24 Hour
Replicate 10.72717036467841
Replicate 21.0977730669518
Replicate 30.89135448951166


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110868.p1 GENE.R_Transcript_110868~~R_Transcript_110868.p1 ORF type:5prime_partial len:442 (+),score=84.70,APO_RNA-bind|PF05634.7|4e-72,APO_RNA-bind|PF05634.7|8.4e-28 R_Transcript_110868:2-1327(+)
AACTCTCTTGTTCGCCGGCGTTTCGTATCTCCAAAACATTTCAGGTACGCGAAACACCAGCTGATGTGGAGAAGAAGAAGAATCAACTTCCATCAATGGCATCCACGCCATCAACAACGTTGGTTTTATAATTATGGTGGTGGTATTGAGAGTGTGAAAGTGACTCCATTTGGGGGAGAAACGCATGACCCATCGTACACCGATTTGCCGGAGCCACGTAGGAGCAAGTCCGAGAGGAAGCCATACCCAACTCCCATGAATGTTCTAATTAGGAGAGCCAAAGAGGAGAGAGAATTCAGGAAGTCTAACCCTTGTCGAGTGCTTGAAGACCCCCCGGATAATGGGCTCCTTGTTTCTGAGCTTGTTGAAGTTTCTCGGCAAGTGTACTGGGCTAGAGACTCCCTTCTTGTTGGTGTCTCCAAGCTCATTTCCTTCATTCCTGTTCTTAAATGCAGGTTTTGCTCTGAAGTACACATTGGCCCTGTGGGTCATGAGATACGTACTTGTACAGGACCAAGGAGTGGTTTTCGGAGTGCTATGCATGGTTGGAGAAAAGGAGGCTTGCGTGATGTTATTAATTTCCCTCAATGCTTCCATCTCTATGACCGTGTTGGGAAACCAAGAGTTGTTCATAATGAGAGATTCAATGTCCCTCGTATCCCTGCAATTTTGGAGCTCTGTATACAAGCTGGTGTTGATCTTGTAAAGTATCCTGCGAGAAGAAGAACGAAGCCTGTATATTGTATTGAAGGAAGAATTGAAGACTTTGATTCTGTAACTGATGAGAGTGCGATTGGTCATGATGAAGATTCTAATAGTGATAAGCTCCAACTAGAAACCGGTATGAAGGGTGATACGGAAGAGGACCATATTCATCCATTGGTTCAGTTGAAGCCGGAGCAGGTGGAAAGCCTGAAGGACTTAAGCATGGGAACAATGGAATCTTGGCTTGAGATGATATCAGGTGCGAGAAAGATCATGGAGAAATACTCTGTATGGACGTGTGGATACTGCCCTGAGGTTCAAGTTGGTCCCAAGGGACACAAGGTAAGAATGTGCAAGGCATCTAAGCACCAGTCACGTGATGGTTTGCATGCATGGCAAGAGGCGACAATTGATGATCTTGTGGGTCCAAACTATGTCTGGCATGTTCGGGATCCATCTGGCCCACCTCTGAGCAACAACTTGAAGAGGTACTATGGCAAGGCCCCAGCTGTCGTAGAGTTGTGTGTGCAGGCAGGTGTGCCTGTTCCAGACCAATACAGAAGCATGATGAGATTGGACGTCATTCCTCCTGAACGTGATGAAGTTGATCTTGTTGCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110868.p1 GENE.R_Transcript_110868~~R_Transcript_110868.p1 ORF type:5prime_partial len:442 (+),score=84.70,APO_RNA-bind|PF05634.7|4e-72,APO_RNA-bind|PF05634.7|8.4e-28 R_Transcript_110868:2-1327(+)
NSLVRRRFVSPKHFRYAKHQLMWRRRRINFHQWHPRHQQRWFYNYGGGIESVKVTPFGGETHDPSYTDLPEPRRSKSERKPYPTPMNVLIRRAKEEREFRKSNPCRVLEDPPDNGLLVSELVEVSRQVYWARDSLLVGVSKLISFIPVLKCRFCSEVHIGPVGHEIRTCTGPRSGFRSAMHGWRKGGLRDVINFPQCFHLYDRVGKPRVVHNERFNVPRIPAILELCIQAGVDLVKYPARRRTKPVYCIEGRIEDFDSVTDESAIGHDEDSNSDKLQLETGMKGDTEEDHIHPLVQLKPEQVESLKDLSMGTMESWLEMISGARKIMEKYSVWTCGYCPEVQVGPKGHKVRMCKASKHQSRDGLHAWQEATIDDLVGPNYVWHVRDPSGPPLSNNLKRYYGKAPAVVELCVQAGVPVPDQYRSMMRLDVIPPERDEVDLVA*

Click here to download the sequence:
Link to NCBI Protein BLAST