Transcript Information: R_Transcript_110912.p1


Annotated TAIR IDAT5G17350.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5718853-5719404 | Forward length=183
E-Value5.4E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.348334157917
Replicate 21.7189953557203
Replicate 31.3395752980206
Condition 2: 8 Hour
Replicate 12.0046906974353
Replicate 21.9614808632619
Replicate 33.184493091296
Condition 3: 24 Hour
Replicate 12.5508674697449
Replicate 21.9346718325068
Replicate 31.4079810032507


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110912.p1 GENE.R_Transcript_110912~~R_Transcript_110912.p1 ORF type:complete len:171 (+),score=46.59,DUF4228|PF14009.2|3.9e-34 R_Transcript_110912:129-641(+)
ATGGGGAACTATGCTTGTTGTGCTTTGCTAGGAGCAAATTCCAAGCACAGCAAATCAACAGCAGCAGCAAAAGTGATCTTTCCGGGTGGCGAAATCAAGACTTTGTATGAAGCTGTCACAGCAGCTGAGCTAATGCTCGAGGCCCCAAATTGCTTCCTTGTCAACTCCAAGTCCCTCAAATTGGGTCGCCGATTTTGTCCCCTTGGCGCAGACGAAGAGCTGGAGATGGGGGATGTTTATGTTGTGTTGCCCAAACAGAGGTTGAATTCTGCAGTCAATACTGCTGATATGGGAGCTCTTTTTCTTGCAGCCAAACGCGGTTCTTCTGTGAAAGTTAAGGTTCACAGGGATCAAGTGTCTCAGGGTAGTTGCAGCCAAGTTGCTCCTGTGACTGTGAGTACTGTCCCCAAGTTCAATTTGGAAGATATAGAGGAGTTCTTGTCTCCTGAGGTTAAGCACAAGCTGTCCATGTCTAGATCAAAGAAGCCCTTGTTGGAGACTATTGTTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110912.p1 GENE.R_Transcript_110912~~R_Transcript_110912.p1 ORF type:complete len:171 (+),score=46.59,DUF4228|PF14009.2|3.9e-34 R_Transcript_110912:129-641(+)
MGNYACCALLGANSKHSKSTAAAKVIFPGGEIKTLYEAVTAAELMLEAPNCFLVNSKSLKLGRRFCPLGADEELEMGDVYVVLPKQRLNSAVNTADMGALFLAAKRGSSVKVKVHRDQVSQGSCSQVAPVTVSTVPKFNLEDIEEFLSPEVKHKLSMSRSKKPLLETIVE*

Click here to download the sequence:
Link to NCBI Protein BLAST