Transcript Information: R_Transcript_11092.p1


Annotated TAIR IDAT2G39140.1
Annotated Gene Namepseudouridine synthase family protein
Annotated Gene Symbol(s)SVR1
Annotation TypeOrtholog
Chromosome Positionchr2:16330238-16333153 | Forward length=410
E-Value2.8E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0578115691579
Replicate 24.9831219654681
Replicate 35.6808709238458
Condition 2: 8 Hour
Replicate 15.9419032271982
Replicate 25.6647567331003
Replicate 37.2122399531671
Condition 3: 24 Hour
Replicate 15.8771986502923
Replicate 24.2346097069908
Replicate 35.4281507623505


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11092.p1 GENE.R_Transcript_11092~~R_Transcript_11092.p1 ORF type:complete len:375 (+),score=62.68,PseudoU_synth_2|PF00849.18|3.9e+03,PseudoU_synth_2|PF00849.18|2.9e-17,S4|PF01479.21|7.2e-12 R_Transcript_11092:783-1907(+)
ATGGCGGCCATTACAGCAGCCATAACAAGTACTTCAACCCAATTCGCGGCCTATCACCTTATAAAACTCTCATCTCTCTCAATCCAAAGACCCTCCTCCCTTCCAACTCTCTCTCTTTGCTTCAGCACTTCACTCAATTCCCCTTCTTCTTCTTCTACCCTGATCAATGATTTCCACACCACCATTACCACTTTCTCTTCCAACAATTCCCACGCGCCTCCGAAAGTGCGTTCCTCACACGCGCTTTCCGAGAAGAAGGTGAAGCAGGAAGGGGATAATAAGACGACGAAAAAGTCCGGTAGCGAAGAGCCCAAGCACTCGAAGGCTGTCCGCAGGTTTTATAATGAGAAGTTTAGAGAGTCTCAGGCTCAGCGCCTTGCTAAAGTCCTTGCTGCTGCTGGTGTGGCATCACGGAGAAGCAGTGAGGAGCTTATATTTCAAGGAAAGGTGACTGTCAATGGTTCTGTTTGTGATACGCCTCAGACAAGAGTTGATCCTGCTCGAGATGTTATCTATGTCAATGGCAATCGCCTGCCTAAAAAGCTGCCACCTAAGTTGTATCTTGCTTTAAACAAGCCCAAGGGGTACATATGCTCTTCCGGAGAGAAAGAGTTCAAATCTATCTTGTCTTTATGTGAAGCTTATCTGAAGATTTGGGATAAAAGAAACCCAGGACAACAAAAGCCACGTCTATTTACTGTTGGACGTTTGGATGTTGCCACAACTGGATTAATTATTGCAACCAATGACGGAGATTTTGCTCAGAAAGTATCACATCCTTCGTCTAATTTAACAAAGGAATACATAGCCGCTGTTGATGGTGAAGTTCACAAACAACACTTAATGGCCATTAGCAATGCAACAATAATTGATGGTGTGCATTGCACTCCTGAGTCTGTAGAACTACTTCCGCGGCAGCCAGATATAACCAGAGCTCGCATTCGTATTGTGGTTAATGAAGGAAGAAACCATGAGGTCCGAGAGCTGGTGAAGAATGCTGGTCTTGAGATACATTCCTTAAAACGTACAAGAATCGGTGGATTCAGGCTTTCTGCTGATCTTGGGCTTGGTAAATGTGTTCAACTGAAAGAAAATGATCTCAAAGCTCTTGGATGGGATAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11092.p1 GENE.R_Transcript_11092~~R_Transcript_11092.p1 ORF type:complete len:375 (+),score=62.68,PseudoU_synth_2|PF00849.18|3.9e+03,PseudoU_synth_2|PF00849.18|2.9e-17,S4|PF01479.21|7.2e-12 R_Transcript_11092:783-1907(+)
MAAITAAITSTSTQFAAYHLIKLSSLSIQRPSSLPTLSLCFSTSLNSPSSSSTLINDFHTTITTFSSNNSHAPPKVRSSHALSEKKVKQEGDNKTTKKSGSEEPKHSKAVRRFYNEKFRESQAQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCDTPQTRVDPARDVIYVNGNRLPKKLPPKLYLALNKPKGYICSSGEKEFKSILSLCEAYLKIWDKRNPGQQKPRLFTVGRLDVATTGLIIATNDGDFAQKVSHPSSNLTKEYIAAVDGEVHKQHLMAISNATIIDGVHCTPESVELLPRQPDITRARIRIVVNEGRNHEVRELVKNAGLEIHSLKRTRIGGFRLSADLGLGKCVQLKENDLKALGWDK*

Click here to download the sequence:
Link to NCBI Protein BLAST