Transcript Information: R_Transcript_110977.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value9E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0508944892942
Replicate 20.67144608072863
Replicate 30.85133078360809
Condition 2: 8 Hour
Replicate 11.4814265741635
Replicate 21.3915155510504
Replicate 31.7571135604869
Condition 3: 24 Hour
Replicate 12.1429932416526
Replicate 21.3915591175559
Replicate 32.326869210448


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110977.p1 GENE.R_Transcript_110977~~R_Transcript_110977.p1 ORF type:complete len:1157 (+),score=150.04,RVT_3|PF13456.2|8e-23,zf-RVT|PF13966.2|4.4e-14,Exo_endo_phos|PF03372.19|5.7e-06,RVT_1|PF00078.23|1.5e-05 R_Transcript_110977:1385-4855(+)
ATGAATCTCTTGAGCCTTAACTGTCGGGGGCTTGGCGATCCCCGAGCAGTTAAGGACCTTCGTGGGTTACTACGAAGGTGGAAGCCAGGGCTCGTGTTCTTATCGGAGACGAAGCTGAGTAGTTGTGAAATGGGCAGAGCTATGAAGAGGTTGGGTGATTTTGAAGGAGTTTTTGTTGATAGTATAGGACGTTCAGGGGGTTTGGCTTTGATGTGGACGAAGGAGTTACATGTTCAATTTTTGTCCAAGTCATTACATCACATAGATGTCAGTGTTCAGTTGACGGATCATACTACGGAGTGGCGATTTACGGGCATTTATGGTTGGCCAGAAGCAATGAATAAACATCTCACGTGTGAGTTGATCAAGGAGCTCAAACAACAACCAGGCCTCCCTTGGCTTTGCGGGGGCGACTTTAATGAAGTCTTCTTCAATTATGAAAAGAAAGGGGGGAACCCAAAGGATCAGAGGCTCTTAGATAATTTTTGTGATGCTTGTGACATAGCTGACTTGAGAGACTTGGACTATGCAGGCCACGATTTCACTTGGTGGAATGGCAGAGAGGGGGAGGCGAGTGTAGAGGAGAGGTTGGATAGATACATGTCAAATACTGACTGGGCCGCAGAATTTCCGAGCGCTGAGGTACTCCATGTAGATGAGAGTTTTTCTGATCATCTCCCTATTCTACTTAAACTCAATTTACATGGAAGGCGCGAGAGAAGGCAACGCAAGAAGCTCTTTCGTTTTGAGAATATGTGGGCAATGGAAGGGAGTTGTGAAGACTTAATTAAAAAAGTTTGGGGCAAAACACATGATGGTACGTGGGGGGAGTGTTGGACAGAGTGCATGGCAAAATGTCAACATGAACTTAGGCGGTGGAACTTTGAAGAGTTTGGTCATATCCAAACCAAAATAAAAAGGGTGCAAAGAGGCCTTGCTGATGAGCCTGACATACACCAACGCAAGTTCCTTCTACATGAACTAAGGGACCTGCGACGCAAGGAAGAGATCATGTGGTGGCAGCGTTCTCGCATCAATTTTCTACGGCACGGAGACTCCAACACTGCTTGGTTCCACGAGAGAGCAAATGTGCGCAAGAAAAAGAATTACATCTCCAAGTTACAAAACAAGGAAGGGCAAATAGTAGAGGAGGACGATAAACTGGAGGAGGTGATCATGGAACATTTTCAAGATATTTTCCAAGCGGCAGGGACTTACAACATCGAGCAGGTTATCCAAGGGGTGGAGACGAGGGTCACGGCAGATATGAATGAAGAGCTATGCAAGCCATATACCGCAGCGGAGATCTATGAGGCGCTGAGACAAATGCACCCTAGCAAGGCCCCGGGCCCGGACGCGTCCACAGGATCTTTTGTAGGGCATAGAATATGCCAAGGTGCCCCCATGGTGACTCACCTATTATTTGCCGACGACACCATAATTTTTTCGAAGGCTGATGAGAGTCATGCACAACAAATTGCACATATGCTACAACTCTACGAGCACGCCTCTGGACAACAGGTGAACAAATTAAAGACCACGGTGTCATTTAGTAAGGGGGTACCACAACATACCCGAAGTATGATCACCCAAGTGCTTGGAGTTTCGGAGATAACTTCTCAAGACAAATATCTCGGCCTACCTACTCACATTGGTCGATCCAAAAAGAAGGCTTTTCTCCCATTGAAAGATCGCATCAAAGGAAAGCTCCAAGGATGGATGGAGAAATACCTCTCGTGGTCCGGTAAGGAGATACTTATTAAAGCGGTTGCCCAGGCCATACCGACCTATGCTATGAGTGTCTTCAAGCTCCCCGGGGAATTTTGCAATGAGCTAGAAGCCTTGGTGCGAAAATTTTGGTGGGGACATAAGGATGGTCGGAGGAAGATACATTGGATCAAGTGGGGAAAACTATGTAAGTCTAAGGTGGATGGGGGCTTGGGTTTTAGGGACCTTAAAGCTTTTAATGATGCCTTGCTTGTTAAGCATCTTTGGAGACTTTTGTGTGAACCACATTCTTTGAGTGCCAAGATTTTGCAAGCAAGATACTTCCCAGATGGTAACCTCCTTGAAGCGGCTTTGGGAACACTGCCAAGCTACATTTGGCGGAGTTTATGGGGTGTTCGAGATGTCCTCAAGACGGGATTGAGATGGATGATCGGCAACGGTGAAAGTGTGCATGTTTGGAATGATCCTTGGCTTCCTAGGCCCACTACTTTCAAGCCTATCCCAGCTCGCGCTCATATTAATCCATCTCTAAAAGTGGCGGATTTGATAGATAGAAATAAGGGTGAGTGGCGGGAGGACATTTTGAAGAATTTATTCTTACCAATGGACGTAGAACTCATAAAATCTATACCATTGTGTAACTTCTGGCCAGAAGATAAGTTTGTGTGGCACTACACTTCCTCGGGATGCTTCTCGGTTCGTTCGGCCTATCACTCGATTATAGAGCGCCGTGGGCTAGATGATCCTGGAGCAAGTGTTTCATCCCACAAAACCTTTTGGAAGAAATTGTGGAAGCTGGACATACCCCCAAGGATTAAAAATTTTGGGTGGAGGGCGGTGTCACAAGCTCTTCCAACAGGAGTGGCGGTGGCGAAAATAGTGCATAATGGGTTTGGTTGTAGTCTTTACGGTGCACAAGAGGATACCGATTTACATGCATTGATGGAATGCCCTTTGGCGCGTCGAGCTTGGGAGAAGAGTGGCTGGGAGAAATCTTTTTGGACTAAAAAATACAGGTGTGTTAGAGATTGGTGGGAAGATGTTTGGAATTCTCCTTTCCTGGGTGATTTTGGGGTCTTTCTAGCGGCAGCATGGGGAATATGGAATGAGCGTTGCAAGCTGTTATATGAGGAGGAGCACGAGTATGGTGAAAGGGTATGTGAGAATGCAAGAAAATTCGTGGAGCGTTACCGAGAGGCCAATGCCCGAACTGAGACTAGTAGTGGCGGGGTACAAGACCAGTGGGAGCCCCCTACGAATGGCCTTTGGAAGCTTAATGTTGATGCAGGGAAATTAGGGGAGTGGGGAAGGGGCTGGGGAATGGTGGTGCGTGATGGGGCTGGCGATATTGTGATGATGGGTGTACATCAGGAGCAGGGAATTCATAACATAGAGATAGAGGAGGCGCGTGCTCTTCTATATGGCCTAAAGCTTGCATGGGAGGCTGGTTATCGATCGATCATTGCGGAAAGTGATTGTCTCAGCATCATTTCCAAGCTCAAGAACAGACAAGAGATACGATCACCTCTCGGCTGCATCCTAGATGAAATTTTAGCATGGTCTAGTAAATTTGATTTTCTTTCTTGGTCTCATGTATGTAGGGAGGGCAATTATGTAGCCCATAATATAGCTAGGTTCCAACCTTTTGCGATTGAGGATAAAGTTTGGCTCGAAGATATGCCTACACACATTGTTGAGCTTGGGCATATTGATTTATGTAATCACCTAGCTAATATGAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110977.p1 GENE.R_Transcript_110977~~R_Transcript_110977.p1 ORF type:complete len:1157 (+),score=150.04,RVT_3|PF13456.2|8e-23,zf-RVT|PF13966.2|4.4e-14,Exo_endo_phos|PF03372.19|5.7e-06,RVT_1|PF00078.23|1.5e-05 R_Transcript_110977:1385-4855(+)
MNLLSLNCRGLGDPRAVKDLRGLLRRWKPGLVFLSETKLSSCEMGRAMKRLGDFEGVFVDSIGRSGGLALMWTKELHVQFLSKSLHHIDVSVQLTDHTTEWRFTGIYGWPEAMNKHLTCELIKELKQQPGLPWLCGGDFNEVFFNYEKKGGNPKDQRLLDNFCDACDIADLRDLDYAGHDFTWWNGREGEASVEERLDRYMSNTDWAAEFPSAEVLHVDESFSDHLPILLKLNLHGRRERRQRKKLFRFENMWAMEGSCEDLIKKVWGKTHDGTWGECWTECMAKCQHELRRWNFEEFGHIQTKIKRVQRGLADEPDIHQRKFLLHELRDLRRKEEIMWWQRSRINFLRHGDSNTAWFHERANVRKKKNYISKLQNKEGQIVEEDDKLEEVIMEHFQDIFQAAGTYNIEQVIQGVETRVTADMNEELCKPYTAAEIYEALRQMHPSKAPGPDASTGSFVGHRICQGAPMVTHLLFADDTIIFSKADESHAQQIAHMLQLYEHASGQQVNKLKTTVSFSKGVPQHTRSMITQVLGVSEITSQDKYLGLPTHIGRSKKKAFLPLKDRIKGKLQGWMEKYLSWSGKEILIKAVAQAIPTYAMSVFKLPGEFCNELEALVRKFWWGHKDGRRKIHWIKWGKLCKSKVDGGLGFRDLKAFNDALLVKHLWRLLCEPHSLSAKILQARYFPDGNLLEAALGTLPSYIWRSLWGVRDVLKTGLRWMIGNGESVHVWNDPWLPRPTTFKPIPARAHINPSLKVADLIDRNKGEWREDILKNLFLPMDVELIKSIPLCNFWPEDKFVWHYTSSGCFSVRSAYHSIIERRGLDDPGASVSSHKTFWKKLWKLDIPPRIKNFGWRAVSQALPTGVAVAKIVHNGFGCSLYGAQEDTDLHALMECPLARRAWEKSGWEKSFWTKKYRCVRDWWEDVWNSPFLGDFGVFLAAAWGIWNERCKLLYEEEHEYGERVCENARKFVERYREANARTETSSGGVQDQWEPPTNGLWKLNVDAGKLGEWGRGWGMVVRDGAGDIVMMGVHQEQGIHNIEIEEARALLYGLKLAWEAGYRSIIAESDCLSIISKLKNRQEIRSPLGCILDEILAWSSKFDFLSWSHVCREGNYVAHNIARFQPFAIEDKVWLEDMPTHIVELGHIDLCNHLANMN*

Click here to download the sequence:
Link to NCBI Protein BLAST