Transcript Information: R_Transcript_110980.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value2E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44196031367358
Replicate 20.50838499797332
Replicate 30.61010681248832
Condition 2: 8 Hour
Replicate 10.59287808588971
Replicate 20.59556828148436
Replicate 31.8019758727261
Condition 3: 24 Hour
Replicate 10.55587910962964
Replicate 20.21361025559881
Replicate 30.58296550013528


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_110980.p1 GENE.R_Transcript_110980~~R_Transcript_110980.p1 ORF type:complete len:413 (+),score=53.48,RVT_3|PF13456.2|5.7e+03,RVT_3|PF13456.2|7.4e-20,zf-RVT|PF13966.2|1.2e-18,zf-RVT|PF13966.2|7.9e+03 R_Transcript_110980:248-1486(+)
ATGAGAGCTCATTTGGCACCAAATTTGCGGGTATGTGATTTGATTGATAAAGAGGCCGGGGACTGGAATATGGAAGCACTGCAAACCCACTTTGTACCAGCTGATGTGGAGATAATAAGAAGTATACCCCTGTGTAATTTCTGGCCATCTGATAAGTTGGTTTGGCACTATACTAATACTGGGTGTTTCACGGTTCGGTCAGCATATCACTTGAAAATGGAGCACCGAAACACCAGCAGACCAGGTGCGAGCTCATCCAATCATCGGGCCTTCTGGAAACATCTCTGGCAACTGAATGTCCCACCAAGAATCAAGAATTTCGGATGGCGAGCTGCTTCCAATGCCCTTCCAACAGGGGCGGCCATAGCTAGAAGATTAAATTCGGCTGAATTTGGGTGTCAAGTGTGTGGCGCACATGAAGATACGACACTACATGCTCTCATGGAGTGCCCATGGTCAAGACAGGCGTGGGATAAGAGTGGATGGGACAAGGCTGTCTGGACAAAAAGTTATGTGTGTATGCGAGATTGGTGGGAGGACGTGTGGGCCGCGCCTGCTACGAAGGATTTTGGACTCTTCCTCGCTGCAGTTTGGGGAATTTGGTCCGAGCGGTGCAGGATGCTATATGACAGTGAGCATGAACATGAGGAAATGATGTGTGGTAATGCGGAGAAATTTGTCATGAAATTTAGAGAGGTCAAAGTCCAAACTGATGTAGAGCACTTGAGCTTGAAGGCTGGGTGGGCACCCCCAACAGGTGGCATGTGGAAATTAAATGTTGATGCAGGGAAGCTAGGGGACTGGGGCTGTGGATGGGGCATGGCGGTTCGTGATGGTGAGGGTGAGCTGGTGATGATGGGGGTTCATCAAGTAAAGGGTCATTATGTCGCTGAGTTGGAGGAGGCCCGAGCACTGCTATTTGGACTGCGCCTAGCTTGGGAGGCGGGGTACCGATCACTCATTGCTGAGAGTGATTGTCTTAGTGTAAGTTCAAAGCTTAAATGTAAGAAGGAGCTGCGATCTCTGCTAGGATACATTCTTGATAAAATTCTAGGATGGGCTAGTAAATTTGTTTTTCTTTCTTGGTCTCATGTATGTAGGGAGGGCAATAGTGTAGTCCATAACATAGCTAGGATCCAGCCCTATGAGTTGGAAGATAGAATTTGGCTTGAGGATATGCCTAGGCGCATTGTTGAGCTTGGGCAAATGGACTTGTGTACTTTCCTAGCAAACAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_110980.p1 GENE.R_Transcript_110980~~R_Transcript_110980.p1 ORF type:complete len:413 (+),score=53.48,RVT_3|PF13456.2|5.7e+03,RVT_3|PF13456.2|7.4e-20,zf-RVT|PF13966.2|1.2e-18,zf-RVT|PF13966.2|7.9e+03 R_Transcript_110980:248-1486(+)
MRAHLAPNLRVCDLIDKEAGDWNMEALQTHFVPADVEIIRSIPLCNFWPSDKLVWHYTNTGCFTVRSAYHLKMEHRNTSRPGASSSNHRAFWKHLWQLNVPPRIKNFGWRAASNALPTGAAIARRLNSAEFGCQVCGAHEDTTLHALMECPWSRQAWDKSGWDKAVWTKSYVCMRDWWEDVWAAPATKDFGLFLAAVWGIWSERCRMLYDSEHEHEEMMCGNAEKFVMKFREVKVQTDVEHLSLKAGWAPPTGGMWKLNVDAGKLGDWGCGWGMAVRDGEGELVMMGVHQVKGHYVAELEEARALLFGLRLAWEAGYRSLIAESDCLSVSSKLKCKKELRSLLGYILDKILGWASKFVFLSWSHVCREGNSVVHNIARIQPYELEDRIWLEDMPRRIVELGQMDLCTFLANN*

Click here to download the sequence:
Link to NCBI Protein BLAST