Transcript Information: R_Transcript_111041.p1


Annotated TAIR IDAT5G64830.1
Annotated Gene Nameprogrammed cell death 2 C-terminal domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25914911-25916512 | Reverse length=380
E-Value5.3E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7551440325748
Replicate 27.4520548109659
Replicate 36.4091390165401
Condition 2: 8 Hour
Replicate 17.1047069276981
Replicate 26.7198505014962
Replicate 37.1477844930021
Condition 3: 24 Hour
Replicate 16.4234279289949
Replicate 25.4281077580436
Replicate 36.8611716764626


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_111041.p1 GENE.R_Transcript_111041~~R_Transcript_111041.p1 ORF type:complete len:386 (+),score=80.89,PDCD2_C|PF04194.9|7.8e+02,PDCD2_C|PF04194.9|6e-34 R_Transcript_111041:3-1160(+)
ATGCGGGAGTTGATTCTTGGCTTGCCTGGACCATGGGCTGATGATAATAAAGAGGTGTCTGATCATTATACAACTAAAATTGGTGGTCTTCCTGACTGGCCTTTCTCTGAGATGTCCTTAGGATCTGATCTGCTTCAATGCAGTTCCTGTAGAAGTAATCTCTGTCTCATTTCACAGGTATATGCCCCTATTTCAAGTGCCACAGTGAAGATTGAAGAACGGATAATTTACATTTTCGGTTGTACAAATGCACAATGTGGGAGCTGGCATGCTATTCGTGTTCAGAAACCTGACAGCTGCGAAGAATTGAAAACTTCAAAATCAGAAGTGGCCTCTTCAACTATTTCATCTGCTTCAGCTTCAGACACTAAGTTTTGGGATGATCTATACTCATTTGAGTCTGAAGGGGAGGGTTGTGGAGATAACGAAGACATGAGCATGGAGGAACTGAGCAGGGCCCTCTCAGAAGCTGGGAGTCTTGCTTCTGGTCCAGTAAAACAAGATGTTAAGAAGCATACTGAGAGTAATGGGGGTCCTCTTTCATTGAACCCAAAAACTAGAGAAGTTGATTCCAGTGTTTTTGTGCTCCCCTGTTTCTATGTATATTGCCAGGAGGATAGATCCTCATCCTCGGATTTGGCATCTGTTTGCTCGAGTTATTCTTCGCTGTCAATTAAGGAGATTGGAATTAACAGAGATAACGATGATAAGGTACAGGAAGAAGCCTGGGAAGAGGAAGGTTACGAGTATGATAAAGCTTTGAATGCCGATAGGACTTACCTGAAATTCAAGAAAAGAGTCGATTCATGCCCGGAGCAGTGTTTCAGGTACTCTCTTGGAGGAAAGCCTCTGTTAGCTACTGGACAAATGGGTGACCCTGGAAGATGCAGCCTTTGTGGTGAATCAAGGCATTTCGAAATGCAGCTGATGCCCCCATTAGTTTATTTCCTACAGGAAGAAGCTACTGGTGGGCAGAAAGAATTACTGGAGAACTGGTGTTGGATGACCCTAATAATATATACTTGTTCAAAGAGCTGCTTTCAGAAGGAAAATGAAGAAAGGCCAAATCTGCATGGTTGGACTGTTATAGAGGAAACTGTTCTAGCACAATTTGAGAAGCCTTTGACAGAGTCCTCTCGAGTAGGTTATTTCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_111041.p1 GENE.R_Transcript_111041~~R_Transcript_111041.p1 ORF type:complete len:386 (+),score=80.89,PDCD2_C|PF04194.9|7.8e+02,PDCD2_C|PF04194.9|6e-34 R_Transcript_111041:3-1160(+)
MRELILGLPGPWADDNKEVSDHYTTKIGGLPDWPFSEMSLGSDLLQCSSCRSNLCLISQVYAPISSATVKIEERIIYIFGCTNAQCGSWHAIRVQKPDSCEELKTSKSEVASSTISSASASDTKFWDDLYSFESEGEGCGDNEDMSMEELSRALSEAGSLASGPVKQDVKKHTESNGGPLSLNPKTREVDSSVFVLPCFYVYCQEDRSSSSDLASVCSSYSSLSIKEIGINRDNDDKVQEEAWEEEGYEYDKALNADRTYLKFKKRVDSCPEQCFRYSLGGKPLLATGQMGDPGRCSLCGESRHFEMQLMPPLVYFLQEEATGGQKELLENWCWMTLIIYTCSKSCFQKENEERPNLHGWTVIEETVLAQFEKPLTESSRVGYFS*

Click here to download the sequence:
Link to NCBI Protein BLAST