Transcript Information: R_Transcript_111081.p1


Annotated TAIR IDAT5G18820.1
Annotated Gene NameTCP-1/cpn60 chaperonin family protein
Annotated Gene Symbol(s)EMB3007
Annotation TypeOrtholog
Chromosome Positionchr5:6271549-6274153 | Forward length=575
E-Value9E-273
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6058682437346
Replicate 22.0578303623937
Replicate 33.1220515253562
Condition 2: 8 Hour
Replicate 13.1122921755304
Replicate 23.1503845779312
Replicate 33.9750081450465
Condition 3: 24 Hour
Replicate 14.11342028429
Replicate 23.546404568929
Replicate 34.0222428214819


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_111081.p1 GENE.R_Transcript_111081~~R_Transcript_111081.p1 ORF type:5prime_partial len:653 (+),score=105.73,Cpn60_TCP1|PF00118.20|8.5e-94 R_Transcript_111081:3-1961(+)
GAAAAATCCCTCCTAAAGAAAGAAAAAAAAAAAAAACTCTTTGCTCTTACTGCTGTTCATTTGAGTCTGCAGTCTCTCCCCACTTACCTACGTAAAACCTCGTCTCTCGCCATTCTTCCTCTATCTTCTAGCCGGCAGTTTCCGGCCTTTGGCGGGTTATCTCAGTCCCGCTACACGACCGGGCGACTCTCACATATCTTCAAGTTCTTCAACCATAACTTCAGAATGAGTCTGAATTTCTGTACCACTTACTTGGCTCCAGGATTGCCGACCAAAAACTTGCCAATATCGAATAGGTTGCTTGTTAAAGCTGGTCCAAAGAGCATTACTTTTGATAATAACTGTAGAAAATCTTTACAAACTGGTATTGACAAGCTTGCAAATGCTGTCTCTGTGACGTTGGGACCGAAAGGGCGGAATGTAATTCTCTCAGATTCTAAAACCTTGAAAGTAATAAATGATGGTGTCACCATCGCGAAAGCCATAGAACTTGCGGATGCAGTTGAAAACACAGGAGCAATGCTTATCCAAGAGGTTGCGTCTAAGGTGAACAATGCAGCTGGTGATGGTACGACCACTGCAATTATTTTAGCTCGTGAAATGATCAACATTGGGCTGTTAGCTATTACCTTTGGAGCTAATCCGGTTGGTTTGAGAAGAGGTATGATGAAGACTGCAAATGAACTAATCAGAACTTTGAAGAATCGTAGTATTCCTGTTAAGGGAAGAGATGATATAAAAGCCGTGGCTTCCGTCTCTGCTGGTAATGATGACTTTGTCGGGAGTATCATTGCTGAAGCCATTGATAAGATTGGGGCTGACGGTGTGATATCTATTGAGTCATCCTCAACTTCTGAGACTTCCATTATTGTAGAGGAAGGAATGAAGATCGATAAGGGTTATATGTCACCTCATTTTATTACGAATCAAGAGAGATCTACAGTAGAGTTTGACAATGCTAAAGTTCTAGTAACTGATCAGAAAATATCAACAGTGCAAGAAATTATTCCACTGCTAGAAAAGACTACTCAACTTGGGGTACCTCTGCTGATTATTGCAGAGGACATCTCAAAGCAAGTATTGGAAACACTAATTGTGAACAAAAATAAAGGTATTGTCAGAGCAGCTGTTGTCAAATGTCCTGGGTTCGGAGATGCCAAAAAATCTTTGCTGCAAGATATTGCCCTTATGACAGGTGCTGATTTTCTCTCAGGAGATTTGGGCCTGGATATGGGGTTCGCAACTTCTGATCAGCTTGGTATAGCAAGAAAAGTAACTATATCAAATACTGCTACCACTATTGTTTCAGACCCTTCCACGAAAGCTGAAATCCAAGCAAGGATTTCACAGATAAAGAAGGATTTAGCAGAAACAGATAATTCTCATCTCTCACGGAAGCTCACAGAAAAAATTGCTAAGCTCTCGGGTGGCGTGGCGGTGATTAAGGTTGGAGCGCACACCGATACCGAACTGGAGGATCGCAAACTTAGAATTGAGGATGCAAAGAGTGCCACATTTGCTGCTATGGATGAAGGGATAGTCCCTGGAGGTGGTGCCACATATGTCCATCTCTCGGAAGAAATTCCTGCCATAACTTCTTCTTTGGTCGATACTGATGAGCGGATTGGTGCTGACATCATAAGAAAGGCACTCCTAGCACCTACCAAATCCATAGCAGAAAATGCAGGAGTTGATGGGGATGTTATAGTGGATAGAATAAAAAGCTCTGATTGGCGAGTTGGTTATAATGCAATGACAGGAAGATTCGAAGATCTGATTGATACTGGTGTGATAGATCCCTGTCGTGTCACCAGATGTTGTTTACAATATTCGGTCTCCATTGCTAGCCTCATTTTGACAACTCAAGCAGTATTGGTGGACAAAATCAGGGAACCAAAGCCTCTTGTTCCTCAAGTTCCAGGGATCTCCTTGAGCGAAGATCGCAAAACACTTATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_111081.p1 GENE.R_Transcript_111081~~R_Transcript_111081.p1 ORF type:5prime_partial len:653 (+),score=105.73,Cpn60_TCP1|PF00118.20|8.5e-94 R_Transcript_111081:3-1961(+)
EKSLLKKEKKKKLFALTAVHLSLQSLPTYLRKTSSLAILPLSSSRQFPAFGGLSQSRYTTGRLSHIFKFFNHNFRMSLNFCTTYLAPGLPTKNLPISNRLLVKAGPKSITFDNNCRKSLQTGIDKLANAVSVTLGPKGRNVILSDSKTLKVINDGVTIAKAIELADAVENTGAMLIQEVASKVNNAAGDGTTTAIILAREMINIGLLAITFGANPVGLRRGMMKTANELIRTLKNRSIPVKGRDDIKAVASVSAGNDDFVGSIIAEAIDKIGADGVISIESSSTSETSIIVEEGMKIDKGYMSPHFITNQERSTVEFDNAKVLVTDQKISTVQEIIPLLEKTTQLGVPLLIIAEDISKQVLETLIVNKNKGIVRAAVVKCPGFGDAKKSLLQDIALMTGADFLSGDLGLDMGFATSDQLGIARKVTISNTATTIVSDPSTKAEIQARISQIKKDLAETDNSHLSRKLTEKIAKLSGGVAVIKVGAHTDTELEDRKLRIEDAKSATFAAMDEGIVPGGGATYVHLSEEIPAITSSLVDTDERIGADIIRKALLAPTKSIAENAGVDGDVIVDRIKSSDWRVGYNAMTGRFEDLIDTGVIDPCRVTRCCLQYSVSIASLILTTQAVLVDKIREPKPLVPQVPGISLSEDRKTLI*

Click here to download the sequence:
Link to NCBI Protein BLAST