Transcript Information: R_Transcript_11120.p1


Annotated TAIR IDAT5G24270.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)SOS3, CBL4, ATSOS3
Annotation TypeOrtholog
Chromosome Positionchr5:8238781-8240179 | Reverse length=222
E-Value1.4E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 158.554852620226
Replicate 226.663443449016
Replicate 338.515753480256
Condition 2: 8 Hour
Replicate 121.993940638455
Replicate 236.707465323362
Replicate 342.407302688338
Condition 3: 24 Hour
Replicate 156.886601980152
Replicate 250.258665171006
Replicate 372.442491618581


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11120.p1 GENE.R_Transcript_11120~~R_Transcript_11120.p1 ORF type:complete len:226 (+),score=41.41,EF-hand_1|PF00036.28|43,EF-hand_1|PF00036.28|0.00027,EF-hand_1|PF00036.28|0.00011,EF-hand_1|PF00036.28|9.9e-07,EF-hand_6|PF13405.2|9.2,EF-hand_6|PF13405.2|0.01,EF-hand_6|PF13405.2|0.0025,EF-hand_6|PF13405.2|0.039,EF-hand_7|PF13499.2|0.024,EF-hand_7|PF13499.2|1.1e-10,EF-hand_5|PF13202.2|5e+02,EF-hand_5|PF13202.2|0.36,EF-hand_5|PF13202.2|0.73,EF-hand_5|PF13202.2|1.4e-07,EF-hand_8|PF13833.2|4.3e+03,EF-hand_8|PF13833.2|0.025,EF-hand_8|PF13833.2|1.1e-06 R_Transcript_11120:1074-1751(+)
ATGGGCTGCTGCTCTTCAAAGAAAGTTGGCCGGACACCAGGCTACGAGGATCCTACCATTCTCGCCTCAGAAACACCTTTCACGGAGAGTGAAGTGGAGGCATTACATGAACTTTACAAGAAATTGAGCTGCTCCATAATTGATGATGGGCTTATTCATAAGGAAGAATTCCAACTTGCACTCTTTAGGAACAGTAAAAGAAAGAATCTCTTTGCAGATAGGATCTTTGACTTATTTGATGTCAAGCGCAACGGGGTTGTTGATTATGGAGAGTTTGTTCGGTCATTGGGAGTGTTCCATCCAAATGCAAAGGTGGAAGACAAGATCAACTTTGCATTTAGATTGTATGATCTGAGACAAACTGGATATATTGAACGAGAAGAGTTGAAGGAAATGGTTCTGGCATTGTTGCACGAATCAGATCTGATACTCTCAGATGATGTCGTTGAGACAATAGTGGATAAGACATTTAGAGACGCAGATTTAAAAGGTGATGGAAAGATCGATCAAGAAGAATGGAAGGAATTGGTAAAGAAGCACCCGACATTGATAAAGAATATGACGTTGCCATATTTAAAGGATATCACACTAGCATTTCCAAGCTTTGTTCTATCCTCCGAAGTTGAAGACATAGAAGTGGAACTAGAAAGTTGTGACACAAGTACAACCCTAGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11120.p1 GENE.R_Transcript_11120~~R_Transcript_11120.p1 ORF type:complete len:226 (+),score=41.41,EF-hand_1|PF00036.28|43,EF-hand_1|PF00036.28|0.00027,EF-hand_1|PF00036.28|0.00011,EF-hand_1|PF00036.28|9.9e-07,EF-hand_6|PF13405.2|9.2,EF-hand_6|PF13405.2|0.01,EF-hand_6|PF13405.2|0.0025,EF-hand_6|PF13405.2|0.039,EF-hand_7|PF13499.2|0.024,EF-hand_7|PF13499.2|1.1e-10,EF-hand_5|PF13202.2|5e+02,EF-hand_5|PF13202.2|0.36,EF-hand_5|PF13202.2|0.73,EF-hand_5|PF13202.2|1.4e-07,EF-hand_8|PF13833.2|4.3e+03,EF-hand_8|PF13833.2|0.025,EF-hand_8|PF13833.2|1.1e-06 R_Transcript_11120:1074-1751(+)
MGCCSSKKVGRTPGYEDPTILASETPFTESEVEALHELYKKLSCSIIDDGLIHKEEFQLALFRNSKRKNLFADRIFDLFDVKRNGVVDYGEFVRSLGVFHPNAKVEDKINFAFRLYDLRQTGYIEREELKEMVLALLHESDLILSDDVVETIVDKTFRDADLKGDGKIDQEEWKELVKKHPTLIKNMTLPYLKDITLAFPSFVLSSEVEDIEVELESCDTSTTLG*

Click here to download the sequence:
Link to NCBI Protein BLAST