Transcript Information: R_Transcript_11123.p1


Annotated TAIR IDAT1G19310.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6676424-6677104 | Reverse length=226
E-Value1.1E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.268667547237
Replicate 220.722435628259
Replicate 320.416874813962
Condition 2: 8 Hour
Replicate 121.185596193486
Replicate 225.180297377683
Replicate 327.858776299985
Condition 3: 24 Hour
Replicate 124.654688631491
Replicate 223.397752910004
Replicate 324.457130889272


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11123.p1 GENE.R_Transcript_11123~~R_Transcript_11123.p1 ORF type:complete len:230 (+),score=28.62,zf-C3HC4_3|PF13920.2|2.4e-10,zf-C3HC4_2|PF13923.2|7.1e-09,zf-C3HC4|PF00097.21|1.1e-08,zf-RING_5|PF14634.2|4.3e-08,zf-RING_2|PF13639.2|1.9e-07,zf-RING_UBOX|PF13445.2|2.2e-06,zf-RING_UBOX|PF13445.2|1.8e+02 R_Transcript_11123:117-806(+)
ATGGCGAGTGGTTTTGAGGAATCAACGGCGAAGCCAAGTTCAAGTAACGGAGGAAATAACGATGCTGGTGATTTTGAGTGCAATATTTGTTTCGAATTACCCCAAGATCCAATTGTAACGCTATGTGGGCATCTATTTTGTTGGCCATGCCTATATAGGTGGCTTCATCACCACTCTCAGTCCCAAGAATGTCCTGTTTGTAAAGCCCTTATTCAGGGAGACAAATTAGTACCCCTCTATGGCAGGGGTAAATCTACTAGTGATCCAAGATCGAGAGCCGTGCCAGGCTTCGATATCCCGAATCGGCCCTCCGGTCAGCGCCCCGAGACTGCCCCACCTCCCCCTCCTCATGGACCTGACCATCAGAACCCTTTTCCCAATCTCGGGTTCGGATTCTTGGGTGGTTTTATGCCAATGGCCACTGCAAGGTTTGGGAACATGACCATGTCTGCTGGATTTGGTGGTCTTTTCCCCTCATTGCTGAATTTTCAGTTTAATGGGTTTCCGGATGGTGCTATGTATGGCCCAGCACATGGGTTTCCTTATGGGTACTCGCAGACGGTTCATGGTGCTCATGGTCATGGCTACCATCACATTCACAGGACAGCAAGTCAAGGTCAAGATAACCTCCTCAAGAATCTGCTATTGCTTGTTGGATTTCTTGTGCTTCTTACTTTCATTTGGTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11123.p1 GENE.R_Transcript_11123~~R_Transcript_11123.p1 ORF type:complete len:230 (+),score=28.62,zf-C3HC4_3|PF13920.2|2.4e-10,zf-C3HC4_2|PF13923.2|7.1e-09,zf-C3HC4|PF00097.21|1.1e-08,zf-RING_5|PF14634.2|4.3e-08,zf-RING_2|PF13639.2|1.9e-07,zf-RING_UBOX|PF13445.2|2.2e-06,zf-RING_UBOX|PF13445.2|1.8e+02 R_Transcript_11123:117-806(+)
MASGFEESTAKPSSSNGGNNDAGDFECNICFELPQDPIVTLCGHLFCWPCLYRWLHHHSQSQECPVCKALIQGDKLVPLYGRGKSTSDPRSRAVPGFDIPNRPSGQRPETAPPPPPHGPDHQNPFPNLGFGFLGGFMPMATARFGNMTMSAGFGGLFPSLLNFQFNGFPDGAMYGPAHGFPYGYSQTVHGAHGHGYHHIHRTASQGQDNLLKNLLLLVGFLVLLTFIWS*

Click here to download the sequence:
Link to NCBI Protein BLAST