Transcript Information: R_Transcript_111366.p1


Annotated TAIR IDAT4G21705.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11533257-11534817 | Reverse length=492
E-Value1.1E-203
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3911970698964
Replicate 22.6763686347525
Replicate 33.5778925868317
Condition 2: 8 Hour
Replicate 13.8685029001034
Replicate 24.0546661866423
Replicate 35.3770480293785
Condition 3: 24 Hour
Replicate 14.080472020723
Replicate 24.5931957474093
Replicate 34.6761882544718


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_111366.p1 GENE.R_Transcript_111366~~R_Transcript_111366.p1 ORF type:5prime_partial len:557 (+),score=107.04,PPR_2|PF13041.2|1.3e+04,PPR_2|PF13041.2|7.8,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|3.4e-07,PPR_2|PF13041.2|3.8e+03,PPR_2|PF13041.2|3e+03,PPR_2|PF13041.2|2.3e+03,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|0.045,PPR_2|PF13041.2|3e+02,PPR_2|PF13041.2|3.5,PPR|PF01535.16|0.00012,PPR|PF01535.16|0.11,PPR|PF01535.16|3.6,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|0.017,PPR|PF01535.16|8.5,PPR|PF01535.16|3.5e+02,PPR_3|PF13812.2|9e+03,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|0.073,PPR_3|PF13812.2|8.9,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|18,TPR_11|PF13414.2|1.6e+03,TPR_11|PF13414.2|0.28,TPR_11|PF13414.2|0.0023,TPR_15|PF13429.2|9.4e+02,TPR_15|PF13429.2|0.5,TPR_15|PF13429.2|0.0072,TPR_12|PF13424.2|2.4e+03,TPR_12|PF13424.2|3.2,TPR_12|PF13424.2|9.6,TPR_12|PF13424.2|0.33,TPR_14|PF13428.2|1.4e+03,TPR_14|PF13428.2|7.1,TPR_14|PF13428.2|1.8e+03,TPR_14|PF13428.2|2.6,TPR_14|PF13428.2|1.1e+02,TPR_19|PF14559.2|77,TPR_19|PF14559.2|9.3,TPR_19|PF14559.2|3.8e+03,TPR_19|PF14559.2|0.41 R_Transcript_111366:2-1672(+)
TTCCTTGAACCCCTCTCCCAAACCCTATACAGGGGAGAACTCTACTGTTTCAATCAATCCTCCATTTTCACCTCCCCAATTCGAAAGCCAACATTTTGCAAAATACCCATTTCAGGAAAGATGAGCTTCAAGCTCTTCAAGATCTTAAAGCAATTAAGCTTGAAGCTAAATCAATCTCAATGTTCACCCCAAGCAGCTCTACTTGCAAGCTCTAATGTCATTGATAAAAGAAGGGGCTATTACACTACAAGCAAGCAAGGCAATACAAGCTTGTATTCAAAGATTAGCCCATTGGGAAATCCTAGGATCAGTGTAAAACCTGAGCTTGATTGTTGGGTCAAGACAGGAAAGAAGGTTCGAGTTGGTGAGTTGTTTAGGATTATCCATGATCTAAGGAAACGCAAAAGGTTCAGTCAGGCACTGGAGGTTTCAGAATGGATGTATGAGAAAGGGGTCTGTAAATTTACACCAACTGAACATGCTATTCACTTGGATCTAATTGGCAGAATCCATGGTTTTCTGTCAGCTGAAAGCTATTTCTATAGGTTACAAGAGCAAGACAAAACTGAAAAGACATACGGGGCTCTTCTTAACTGCTATGTGCGGCAACGCCAACTTGACAAATCATTGTCTCATTTGCAGAAGATGAAGGAAATGGGTTTTGCATTAACAACTCTAACATATAACGACATCATGTGCCTTTTCACTAATATTGGACAATATGAAAAGGTTCCTGAGGTACTGGCTGAGATGAAGGAAAACAAGGTTTTACCTGATAACTATACCTACAGACTCTGCATGAATTCTTATGGAGTAAGATCTGATCTCAAGGCAATGGAGAATATTTTGAAAGAAATGGAGACTCAACCCCATTTGGCTGTCGACTGGAATACATATGCAGTCGCTGCCAACTTTTACATAAAAGAAGGACTTACAGATAAGGCAGTTGATGCCCTGAAGAAGGCAGAAATAAGACTAGATAGCAAAGATGGTACAGGCTACAATCATCTCATTTCCCTAAATGCAAAACTGGCGATGAAGCATGAGATATTGAGGTTATGGGAACTGGAGAAAATCGCTTGTAAGAGATGTATAAATAGGGATTTTGTTAATGTGCTGGAATCTCTTGTGAGGATTGATGCAGTAGAAGAAGCCGAGAAAGTGCTCAAGGACTGGGAATCATCTGATAATTGCTACATGTTTCGAGTTCCTAACATTGTCATCATGGGATATTTGGACAAGGGATTGTTTGAGAAAGCAGAAGCAATGCTTGAAGATTTGTCAGAGAAAGGAAAGGATTCTAGCCCAAACACTTGGGGCTTGTTGGCTGCAGGATACTTGGAGATGGGGAATATGCAGAAGGCAATGAGGTGCATGAAGGTAGCGTTTTCTCTCTACGAAGAAAATAGAGGATGGAAACCAAGCCACCAAGTTATCACCAAACTTCTGAATTGGGTCGGTGATCAAGGCAGTGTCGAAGACACTGAATCCTTTGTGGAATTGTTGAGGAAGGTGATTCATGAGAACACACATATGTATCATGCTCTGATGAAGGCATACATCCGTCATTCAAAGGATGTGAACGGGCTTCTAGAGGAGATGAAGGCTCACAAAGTAAAAGAAGACGAAGAAACAAAAAGGATCCTGAGCACAATACGGAAGAAAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_111366.p1 GENE.R_Transcript_111366~~R_Transcript_111366.p1 ORF type:5prime_partial len:557 (+),score=107.04,PPR_2|PF13041.2|1.3e+04,PPR_2|PF13041.2|7.8,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|3.4e-07,PPR_2|PF13041.2|3.8e+03,PPR_2|PF13041.2|3e+03,PPR_2|PF13041.2|2.3e+03,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|0.045,PPR_2|PF13041.2|3e+02,PPR_2|PF13041.2|3.5,PPR|PF01535.16|0.00012,PPR|PF01535.16|0.11,PPR|PF01535.16|3.6,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|0.017,PPR|PF01535.16|8.5,PPR|PF01535.16|3.5e+02,PPR_3|PF13812.2|9e+03,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|0.073,PPR_3|PF13812.2|8.9,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|18,TPR_11|PF13414.2|1.6e+03,TPR_11|PF13414.2|0.28,TPR_11|PF13414.2|0.0023,TPR_15|PF13429.2|9.4e+02,TPR_15|PF13429.2|0.5,TPR_15|PF13429.2|0.0072,TPR_12|PF13424.2|2.4e+03,TPR_12|PF13424.2|3.2,TPR_12|PF13424.2|9.6,TPR_12|PF13424.2|0.33,TPR_14|PF13428.2|1.4e+03,TPR_14|PF13428.2|7.1,TPR_14|PF13428.2|1.8e+03,TPR_14|PF13428.2|2.6,TPR_14|PF13428.2|1.1e+02,TPR_19|PF14559.2|77,TPR_19|PF14559.2|9.3,TPR_19|PF14559.2|3.8e+03,TPR_19|PF14559.2|0.41 R_Transcript_111366:2-1672(+)
FLEPLSQTLYRGELYCFNQSSIFTSPIRKPTFCKIPISGKMSFKLFKILKQLSLKLNQSQCSPQAALLASSNVIDKRRGYYTTSKQGNTSLYSKISPLGNPRISVKPELDCWVKTGKKVRVGELFRIIHDLRKRKRFSQALEVSEWMYEKGVCKFTPTEHAIHLDLIGRIHGFLSAESYFYRLQEQDKTEKTYGALLNCYVRQRQLDKSLSHLQKMKEMGFALTTLTYNDIMCLFTNIGQYEKVPEVLAEMKENKVLPDNYTYRLCMNSYGVRSDLKAMENILKEMETQPHLAVDWNTYAVAANFYIKEGLTDKAVDALKKAEIRLDSKDGTGYNHLISLNAKLAMKHEILRLWELEKIACKRCINRDFVNVLESLVRIDAVEEAEKVLKDWESSDNCYMFRVPNIVIMGYLDKGLFEKAEAMLEDLSEKGKDSSPNTWGLLAAGYLEMGNMQKAMRCMKVAFSLYEENRGWKPSHQVITKLLNWVGDQGSVEDTESFVELLRKVIHENTHMYHALMKAYIRHSKDVNGLLEEMKAHKVKEDEETKRILSTIRKKV*

Click here to download the sequence:
Link to NCBI Protein BLAST