Transcript Information: R_Transcript_111453.p1


Annotated TAIR IDAT5G26800.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: IGR protein motif (InterPro:IPR019083); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9425224-9426485 | Forward length=112
E-Value1.5E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 150.155962275575
Replicate 257.329028962762
Replicate 359.358328727421
Condition 2: 8 Hour
Replicate 145.777921423111
Replicate 248.805055149023
Replicate 347.352027705357
Condition 3: 24 Hour
Replicate 166.677457513506
Replicate 273.645386208536
Replicate 368.327704196488


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_111453.p1 GENE.R_Transcript_111453~~R_Transcript_111453.p1 ORF type:complete len:115 (+),score=19.92,IGR|PF09597.6|2.7e+02,IGR|PF09597.6|8e-18 R_Transcript_111453:194-538(+)
ATGATGTCAGTATGGCGGCAACTCACACGAAATGTGTCTACGACTTCATCTCAAATTCAAGTTTTAACATTTGTTCCTCTACCTCATAGATTCTTCTCCAGTTCATCTCCTTACTTAGTGAAGGTGGGGATACCAGAGTTCTTGAATGGGATAGGTAATGGAGTGGAGGCTCATGTTGAGAAGCTCGAGTCCGAGTTTGGGGATCTTCAAAAGTTGCTTGATACTCGTACTCTGAAATTGAAGAAACTTGAAATTCCTTGCAAACATAGAAAGCTGATTTTGAAGTATTCCCACAAATATAGATTGGGACTGTGGAGACCACGAGCTGATCAAGTCAAAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_111453.p1 GENE.R_Transcript_111453~~R_Transcript_111453.p1 ORF type:complete len:115 (+),score=19.92,IGR|PF09597.6|2.7e+02,IGR|PF09597.6|8e-18 R_Transcript_111453:194-538(+)
MMSVWRQLTRNVSTTSSQIQVLTFVPLPHRFFSSSSPYLVKVGIPEFLNGIGNGVEAHVEKLESEFGDLQKLLDTRTLKLKKLEIPCKHRKLILKYSHKYRLGLWRPRADQVKV*

Click here to download the sequence:
Link to NCBI Protein BLAST