Transcript Information: R_Transcript_111496.p1


Annotated TAIR IDAT3G23740.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14120.1); Has 155 Blast hits to 130 proteins in 48 species: Archae - 0; Bacteria - 16; Metazoa - 19; Fungi - 48; Plants - 47; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8552077-8554730 | Reverse length=566
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9261918595432
Replicate 20.77373301366592
Replicate 31.1894620862324
Condition 2: 8 Hour
Replicate 10.82029698315729
Replicate 21.1985732310183
Replicate 31.6114495190628
Condition 3: 24 Hour
Replicate 12.6149596172259
Replicate 21.625513218066
Replicate 32.0897808495028


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_111496.p1 GENE.R_Transcript_111496~~R_Transcript_111496.p1 ORF type:3prime_partial len:597 (+),score=147.42 R_Transcript_111496:99-1790(+)
ATGGAGCCCAAACGAATCACTAGAAAAAGAAAACAACACCCATCAAATCCTTTAGCTGGGATCTTCACTCGAGGCAAATCGAGGAAATATCTTCACCATTGTAGCAGATCCGGTAAGCTCCGACCCGACCCAGTTCTCAAAACCCGCCCTTTTCAGCTTTCGGACCCGAAAACTAATCAAAGATCGGGCTTTGACAATGATGACGATGATGAAGAGGTCAACCATATTTCGATCAAGGATCTCCGTGCTCGGAGGGTTTTCTCGAAGCCCGTTGATGTCAAGAAAGAAGGAGTTGGTAAGAAAGAAAACCCTAATTTTGATTCTGAGATTAATGTTGGTAAATTGGATGAATGTTATGGGAAATCGGATGGGGTTGAAGTGGTTGGTGAAAACCCTAAATTGTCTGGGCCGGGGAAATGTAATTTTGCGGCTGAGGGTTTAGATAATAGAAACTCTAATTTTGATACTGACACAAGTGTTTGTAAATTGAATGAATCTGATGGGGGTTTTGGAATGGTTGAGAAAAACCCAAAATTTTCTGAGCTGGAGAAATGTGATTTAGCTGTTGATTTTAGGGAAAATGGGGCTAATTGTGGAAATGATAATGTGTCGGTGTTGGAGAAGTGTGATTCTAGGGTTGTTTTGAAGGTTGAGGGTTCAGATGGTATAAATCCTAATTTGTTGGAGAAAGGTGATTTAGTTGTTGATTTCAGGCAAAATGTGTCTGATGATGGAAACGAGAAATGTGATTCTAGGGTTGATTTAAAGAGGGAGGATTTGGAAGGCAGAAACCCTAATTTGGCCGGAGTTGAAGATGATAAGAGAAGCCCTAATTTGTTGAGTGGCGGTGGAGAGAATGAGGGGGTTGAAAAGATGGAAAAATTTGAAGTGGGTTTGGGTTGTAATAATGGGGAAGTTAAGGATGATATGAGTCCTGAAAGTAACAATAAAGAGTCGAAGGGTAGAAAAAGTAGAGATTATTGTGATGGTATGATTGAGGAAAATGTGCAAACAACACCTCCAGATGCGGTCATTAGTGTCAAGCAAACTGAGAATCAGATTATCTTGCAAAATAGAAAACCTTCTTCCAGGTCGCCCCCGAAACAAATTAGTCCGACTAAAGATGAGGAGAGGAAGAAGAGTTTATCGAATTCGAGAAGAAACTCGGTTTTGAGGCCATGCTCGAGGCCAAAGATATTTAAGGCTCTAAATTCCTTCAGTTACAGGAGGTTGCTTCCTTACCTGATGGACATGGAAAAGAATACACCAAGTTCACCGAAACTTAACACATGTGTGAAACTGAAAACTGAGGATGTTGTTGAAGAGAAGCCTATAATTTCTTCCTCTCCTAAAAGCCTTACCGGTGGGAGTAAATCAGGAGAAAAACAAGTGACACCTGTGTCAGGTTTAACTGTCCAAGCAACTGGCAACTATAGTAACCAAGAAGAGGAGAAGCCTTCTTTGGTCTGTAATGATACTAATTCTATTGTTCAGCAAGCTTCTGTTGAAACCCTTGCTGATTGCTCTCCCAGTAGTAGTCAAGTGAGCTTAGTATCGAACGAAATGCAAACCCCTATAACTGATGAATCCCCTAAAGAAGTTCCACAAGGTGAACAGGTTTCCTCAGGTAATTTAGAGAGTTTGGGAAATGTTAGCCCAGTTGTTAAAACTGATGAATCCCCTATAGAAGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_111496.p1 GENE.R_Transcript_111496~~R_Transcript_111496.p1 ORF type:3prime_partial len:597 (+),score=147.42 R_Transcript_111496:99-1790(+)
MEPKRITRKRKQHPSNPLAGIFTRGKSRKYLHHCSRSGKLRPDPVLKTRPFQLSDPKTNQRSGFDNDDDDEEVNHISIKDLRARRVFSKPVDVKKEGVGKKENPNFDSEINVGKLDECYGKSDGVEVVGENPKLSGPGKCNFAAEGLDNRNSNFDTDTSVCKLNESDGGFGMVEKNPKFSELEKCDLAVDFRENGANCGNDNVSVLEKCDSRVVLKVEGSDGINPNLLEKGDLVVDFRQNVSDDGNEKCDSRVDLKREDLEGRNPNLAGVEDDKRSPNLLSGGGENEGVEKMEKFEVGLGCNNGEVKDDMSPESNNKESKGRKSRDYCDGMIEENVQTTPPDAVISVKQTENQIILQNRKPSSRSPPKQISPTKDEERKKSLSNSRRNSVLRPCSRPKIFKALNSFSYRRLLPYLMDMEKNTPSSPKLNTCVKLKTEDVVEEKPIISSSPKSLTGGSKSGEKQVTPVSGLTVQATGNYSNQEEEKPSLVCNDTNSIVQQASVETLADCSPSSSQVSLVSNEMQTPITDESPKEVPQGEQVSSGNLESLGNVSPVVKTDESPIEV

Click here to download the sequence:
Link to NCBI Protein BLAST