Transcript Information: R_Transcript_111551.p2


Annotated TAIR IDAT3G55480.2
Annotated Gene Nameprotein affected trafficking 2
Annotated Gene Symbol(s)PAT2
Annotation TypeHomolog
Chromosome Positionchr3:20566372-20571171 | Reverse length=1115
E-Value9E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4131324610105
Replicate 22.5737400510301
Replicate 30
Condition 2: 8 Hour
Replicate 12.2116265113641
Replicate 20
Replicate 31.6395003140995
Condition 3: 24 Hour
Replicate 11.3330339680602
Replicate 21.4229199284243
Replicate 32.6830089616197


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_111551.p2 GENE.R_Transcript_111551~~R_Transcript_111551.p2 ORF type:complete len:155 (+),score=26.75 R_Transcript_111551:3197-3661(+)
ATGTCAGATATTTCACCATTACTTGTCTGTGTTGAGGTTTTCTTCAAGAATTGCTCTAATGCATCTTTATCAAAAGTGATTTTGGTAGATGATGGATCGAACCGGGTTCCAGATTCTACAGAACAATCCTCGGTGACCACGGAGAGGTCATCTCATTCTCATGATACTGTGCCAACTCTGGTTCCAATGGAAGAGATTGATTCTGTTGAACCAGACCAGATTATAAAAAGAATTCTCCATGTTCGATTTCACCATCATCTTCTGCCGTTGAAGTTATCCGTATGGTGTAGTGGCAAAAAGCATGTTGTGAAATTGCGGCCTGACATTGGTTATTTCATAAAGCCCTTAGAAATGGACATTGGAGCTTTTAGAAGTAAGGAATCCCAGCTCCCAGGGATGTTTGAATATGTAAGGAGGGTGCAATTTCTATCATTTTTCCAGTTGGAAGTTTTGTGTCTCCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_111551.p2 GENE.R_Transcript_111551~~R_Transcript_111551.p2 ORF type:complete len:155 (+),score=26.75 R_Transcript_111551:3197-3661(+)
MSDISPLLVCVEVFFKNCSNASLSKVILVDDGSNRVPDSTEQSSVTTERSSHSHDTVPTLVPMEEIDSVEPDQIIKRILHVRFHHHLLPLKLSVWCSGKKHVVKLRPDIGYFIKPLEMDIGAFRSKESQLPGMFEYVRRVQFLSFFQLEVLCLH*

Click here to download the sequence:
Link to NCBI Protein BLAST