Transcript Information: R_Transcript_111552.p1


Annotated TAIR IDAT3G55480.2
Annotated Gene Nameprotein affected trafficking 2
Annotated Gene Symbol(s)PAT2
Annotation TypeOrtholog
Chromosome Positionchr3:20566372-20571171 | Reverse length=1115
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4053926305477
Replicate 24.3396047474319
Replicate 35.7619410312222
Condition 2: 8 Hour
Replicate 15.7715143411273
Replicate 27.1389622764735
Replicate 37.9183807103887
Condition 3: 24 Hour
Replicate 16.9055145750878
Replicate 25.5865563416766
Replicate 37.7001599602101


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_111552.p1 GENE.R_Transcript_111552~~R_Transcript_111552.p1 ORF type:complete len:1137 (+),score=224.67,Adaptin_N|PF01602.16|3.2e-106,HEAT|PF02985.18|3.3,HEAT|PF02985.18|3.7,HEAT|PF02985.18|4,HEAT|PF02985.18|3.3e+02,HEAT_2|PF13646.2|1.7e-05,HEAT_2|PF13646.2|4.2e+02,HEAT_2|PF13646.2|85,AP3B1_C|PF14796.2|1.4e-06 R_Transcript_111552:191-3601(+)
ATGTTCCCCCAATTCGGAGCAACAGCAGAGACTCTGAGCAAAGCATCAACAATGGTGTTCAGGATCGGTACGGATGCACACCTTTACGACGATCCTGAAGATGTAAACATCACTCCCCTTCTCGACAGCAAATTCGATAACGAGAAATGCGAAGCTCTCAAACGCCTCCTTGCTCTCATCGCTCAAGGCTTTGATGTCTCCAATTTCTTCCCTCAGGTTGTGAAAAATGTCGCATCGCAATCACTGGAAGTCAAGAAGCTGGTATATCTGTACCTGTTGCATTACGCCGAAAAGCGTCCGAACGAAGCATTACTATCAATTAATTATTTCCAGAAGGACTTGGGGGACACCAATCCTTTGGTTCGGGCATGGGCTCTCCGTACCATGGCGGGTATCCGTTTACATGTAGTTGCACCTCTTGTTTTAGTTGCTGTGAACAAATGTGCCAGAGATCCATCTGTATATGTTAGAAAATGTGCAGCCAATGCTCTTCCTAAACTGAATGACTTGCGCCAGGAGGAAAATGCTTCTGCAATTGAAGAGATTATTGGAGTACTACTAAATGACAATTCACCTGGAGTAGTGGGAGCTGCTGCTGCTGCTTTTAATTCAATATGCCCAAATAACTTGCCTTTAATTGCAAGAAACTATAGAAGACTCTGTGAAACTCTACCCGATGTTGAGGAATGGGGTCAAATCATTTTGATTGGTATTCTATTGCGCTATGTGATAGCAAGGCATGGTCTTGTAAAAGAATCTGTGATGTTTTCTTCCCATGTTGCTGGAACTAACAGCTGTCAGAAGGTTGATTCTACTGTGGACATTGGCTTATCAGGGGGCAGTGACTTGGCTATTAGGAACTATAAGTATGAGATAGCAAATCTGGTAGCCAGGTCATACACTGAAGGTCCTGATGAATATCTATCACGGTCAAATTTCAGTGATGAGACTTTGTTTGGCTTAGATGATGCATGTCTTACTGATGCCATGACCAATGATGATGTGAAGATCCTTCTGAAATGTACGTCACCCCTACTATGGAGTCACAACAGTGCTGTGGTGCTTGCTGCTGCTGGAGTGCACTGGATCATGGCACGGAGGGATGATGTAAACAGAATTGTGAAGCCACTGTTGTTTGTCTTGAGATCATCAAGTGCATCAAAATTTGTGGTTCTCTGTAACATTCAAGTGTTTGTGAAAGTCATGCCTTCTCTGTTTGCTGACTATTATGAAGATTTCGTTATATCTACTTCAGAGCCTTACCAAATAAAAGCACTGAAGCTGGAAATTCTCTCTTCAATAGCTACAGATTCATCAATTCCTTACATTTTTCAGGAATTTCAGGATTACATTAGAGATCCCGACAGAAGATTTGCTGCTGATACTGTTGCTGCTATTGGTTTATGTGCACAACGACTCCCTAAACTAGCAAACTTATGCTTGGAAGGCCTGTTATCACTTACTAGACAGGGATCTTTAACTGGTGTGCCAAATGCTGTTGATGGCGAAGCTGGAATTTTGATCCAATCAGTGATGTCAATTAAGTCTATCATAAATCAGGATCCACCAAATCATGAGAAGGTTATAATTCAACTGGTTCGAAATTTGGATGCAATCAAGGTTCCTGCAGCACGAGCAATAATTATATGGATGGTTGGAGAGTACAATTCTGCAGGGGACAGAATTCCCTTAATGTTAACCTCTGTACTGAAGTATTTGGCTCATTGCTTTACGTCAGAAGAATCTGAAACAAAGCTCCAGATACTCAATACCGCTGCCAAGGTCTTGTTATGTGCCAAAGGAGCGGATCGAACAACTATTGAAAAAGTTGTGAACTTTGTGCTTGAGCTAGCAAAATGTGATGCAGACTATGATGTCCGTGACCGAGCCCGTGCTTTAGCAAAGATATTGTCTACCCTTTTGTTTTCTCAAAATCATAATGTCAATGATAATTCATTCAGGACGGAGGCAGCACATGTTGTTGCAGAAAAAATATTTGGGCCCCCTAAAGGCTCACTTTCTCCTGAACCTGTAAATCACCGTTTTTATCTGCCTGGATCTCTTTCACAAATAGTTCTTCATGCCGCTCCAGGCTATGAACCTCTTCCAAAACCCTGTAGTTTGCATTTCTCAGATATAGTTCAAGTAACAGAACTGTCTAAGAAATCTGATATAACAGACAATTCAGAGACACAGTCTGGTTCTCTGGATGCGGAAAGTGCATCAGATTATAGTTCTCAACATTCAGATAGTGGCTCAAGTTTTAGTGATGGCAGTAAGGATAGTGGATATGCAAGTGAAGCCGATGATAATGCTGATCCGTTGATCGAGATTTCTGATTCTAGGACCCCCTACAAGGGGCAAAATGGTGATGGTGGTGAGAGTAACTATTCACAATCTGAATCCAGTGGAGTGGAGAACATATTGTCCAAAAGAGCTTTAGAGTCATGGTTGGGTGAGCAGCCTGTTTCTTTAGACCTGAAGCCATCAGAACATGATCAAGCACAGAGATCTGCCCGAATCTTCATCAGTGATATTAGTAGTCGAGTCAAGCCTAAATCATACACCCTTCTGGATGCTGCAAGTGGACAGGGCTTAAAGATTGATTATTCATTTTCTTCTCAGATGTCAGATATTTCACCATTACTTGTCTGTGTTGAGGTTTTCTTCAAGAATTGCTCTAATGCATCTTTATCAAAAGTGATTTTGGTAGATGATGGATCGAACCGGGTTCCAGATTCTACAGAACAATCCTCGGTGACCACGGAGAGGTCATCTCATTCTCATGATACTGTGCCAACTCTGGTTCCAATGGAAGAGATTGATTCTGTTGAACCAGACCAGATTATAAAAAGAATTCTCCATGTTCGATTTCACCATCATCTTCTGCCGTTGAAGTTATCCGTATGGTGTAGTGGCAAAAAGCATGTTGTGAAATTGCGGCCTGACATTGGTTATTTCATAAAGCCCTTAGAAATGGACATTGGAGCTTTTAGAAGTAAGGAATCCCAGCTCCCAGGGATGTTTGAATATGTGAGGAGATGTACCTTTGCTGATCACATTGTAGAGCTGAACAAAGACAAGAGTGTCAACTCCCTGCCAAAAGACGCTTACCTTGTAGTCTGTGAGAGCCTTGCATTAAAGATGCTAAGTAATGCAAACCTTTTTCTTGTATCTGTGGATTTGCCACTTGCATCAAAGCTTGACGACGCATCAGGTTTGTGCTTACGGTTTAGTGGCGAAATTCTGAGCAATTCCGTTCCTTGCTTGATTACCATTACTGTTGAAGGTAATTGCTTGGAACCACTCAATGTGTCTGTGAAAGTCAACTGTGAGGAAACTGTTTTTGGTTTAAACCTGTTAAATAGGGTTGTAAATTTCATAGCTGAATCCTCTACAAGCTCCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_111552.p1 GENE.R_Transcript_111552~~R_Transcript_111552.p1 ORF type:complete len:1137 (+),score=224.67,Adaptin_N|PF01602.16|3.2e-106,HEAT|PF02985.18|3.3,HEAT|PF02985.18|3.7,HEAT|PF02985.18|4,HEAT|PF02985.18|3.3e+02,HEAT_2|PF13646.2|1.7e-05,HEAT_2|PF13646.2|4.2e+02,HEAT_2|PF13646.2|85,AP3B1_C|PF14796.2|1.4e-06 R_Transcript_111552:191-3601(+)
MFPQFGATAETLSKASTMVFRIGTDAHLYDDPEDVNITPLLDSKFDNEKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDTNPLVRAWALRTMAGIRLHVVAPLVLVAVNKCARDPSVYVRKCAANALPKLNDLRQEENASAIEEIIGVLLNDNSPGVVGAAAAAFNSICPNNLPLIARNYRRLCETLPDVEEWGQIILIGILLRYVIARHGLVKESVMFSSHVAGTNSCQKVDSTVDIGLSGGSDLAIRNYKYEIANLVARSYTEGPDEYLSRSNFSDETLFGLDDACLTDAMTNDDVKILLKCTSPLLWSHNSAVVLAAAGVHWIMARRDDVNRIVKPLLFVLRSSSASKFVVLCNIQVFVKVMPSLFADYYEDFVISTSEPYQIKALKLEILSSIATDSSIPYIFQEFQDYIRDPDRRFAADTVAAIGLCAQRLPKLANLCLEGLLSLTRQGSLTGVPNAVDGEAGILIQSVMSIKSIINQDPPNHEKVIIQLVRNLDAIKVPAARAIIIWMVGEYNSAGDRIPLMLTSVLKYLAHCFTSEESETKLQILNTAAKVLLCAKGADRTTIEKVVNFVLELAKCDADYDVRDRARALAKILSTLLFSQNHNVNDNSFRTEAAHVVAEKIFGPPKGSLSPEPVNHRFYLPGSLSQIVLHAAPGYEPLPKPCSLHFSDIVQVTELSKKSDITDNSETQSGSLDAESASDYSSQHSDSGSSFSDGSKDSGYASEADDNADPLIEISDSRTPYKGQNGDGGESNYSQSESSGVENILSKRALESWLGEQPVSLDLKPSEHDQAQRSARIFISDISSRVKPKSYTLLDAASGQGLKIDYSFSSQMSDISPLLVCVEVFFKNCSNASLSKVILVDDGSNRVPDSTEQSSVTTERSSHSHDTVPTLVPMEEIDSVEPDQIIKRILHVRFHHHLLPLKLSVWCSGKKHVVKLRPDIGYFIKPLEMDIGAFRSKESQLPGMFEYVRRCTFADHIVELNKDKSVNSLPKDAYLVVCESLALKMLSNANLFLVSVDLPLASKLDDASGLCLRFSGEILSNSVPCLITITVEGNCLEPLNVSVKVNCEETVFGLNLLNRVVNFIAESSTSSC*

Click here to download the sequence:
Link to NCBI Protein BLAST