Transcript Information: R_Transcript_111557.p1


Annotated TAIR IDAT3G55480.2
Annotated Gene Nameprotein affected trafficking 2
Annotated Gene Symbol(s)PAT2
Annotation TypeHomolog
Chromosome Positionchr3:20566372-20571171 | Reverse length=1115
E-Value2E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6192589710807
Replicate 20
Replicate 30.97584756575537
Condition 2: 8 Hour
Replicate 10
Replicate 21.2032761528889
Replicate 31.6279471408419
Condition 3: 24 Hour
Replicate 10.87507336966585
Replicate 20.98902506235773
Replicate 30.83428470779653


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_111557.p1 GENE.R_Transcript_111557~~R_Transcript_111557.p1 ORF type:5prime_partial len:446 (+),score=94.34,AP3B1_C|PF14796.2|3.3e-07 R_Transcript_111557:2-1339(+)
TTGTTATGTGCCAAAGGAGCGGATCGAACAACTATTGAAAAAGTTGTGAACTTTGTGCTTGAGCTAGCAAAATGTGATGCAGACTATGATGTCCGTGACCGAGCCCGTGCTTTAGCAAAGATATTGTCTACCCTTTTGTTTTCTCAAAATCATAATGTCAATGATAATTCATTCAGGACGGAGGCAGCACATGTTGTTGCAGAAAAAATATTTGGGCCCCCTAAAGGCTCACTTTCTCCTGAACCTGTAAATCACCGTTTTTATCTGCCTGGATCTCTTTCACAAATAGTTCTTCATGCCGCTCCAGGCTATGAACCTCTTCCAAAACCCTGTAGTTTGCATTTCTCAGATATAGTTCAAGTAACAGAACTGTCTAAGAAATCTGATATAACAGACAATTCAGAGACACAGTCTGGTTCTCTGGATGCGGAAAGTGCATCAGATTATAGTTCTCAACATTCAGATAGTGGCTCAAGTTTTAGTGATGGCAGTAAGGATAGTGGATATGCAAGTGAAGCCGATGATAATGCTGATCCGTTGATCGAGATTTCTGATTCTAGGACCCCCTACAAGGGGCAAAATGGTGATGGTGGTGAGAGTAACTATTCACAATCTGAATCCAGTGGAGTGGAGAACATATTGTCCAAAAGAGCTTTAGAGTCATGGTTGGGTGAGCAGCCTGTTTCTTTAGACCTGAAGCCATCAGAACATGATCAAGCACAGAGATCTGCCCGAATCTTCATCAGTGATATTAGTAGTCGAGTCAAGCCTAAATCATACACCCTTCTGGATGCTGCAAGTGGACAGGGCTTAAAGATTGATTATTCATTTTCTTCTCAGATGTCAGATATTTCACCATTACTTGTCTGTGTTGAGGTTTTCTTCAAGAATTGCTCTAATGCATCTTTATCAAAAGTGATTTTGGTAGATGATGGATCGAACCGGGTTCCAGATTCTACAGAACAATCCTCGGTGACCACGGAGAGGTCATCTCATTCTCATGATACTGTGCCAACTCTGGTTCCAATGGAAGAGATTGATTCTGTTGAACCAGACCAGATTATAAAAAGAATTCTCCATGTTCGATTTCACCATCATCTTCTGCCGTTGAAGTTATCCGTATGGTGTAGTGGCAAAAAGCATGTTGTGAAATTGCGGCCTGACATTGGTTATTTCATAAAGCCCTTAGAAATGGACATTGGAGCTTTTAGAAGTAAGGAATCCCAGCTCCCAGGGATGTTTGAATATGTAAGGAGGCAACTATCTACCATGTGGCCTACCTTGTTGAGGAGCGTCAACATCTTTTCCTGTGTGGATGGCAGTCCATGCTGTAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_111557.p1 GENE.R_Transcript_111557~~R_Transcript_111557.p1 ORF type:5prime_partial len:446 (+),score=94.34,AP3B1_C|PF14796.2|3.3e-07 R_Transcript_111557:2-1339(+)
LLCAKGADRTTIEKVVNFVLELAKCDADYDVRDRARALAKILSTLLFSQNHNVNDNSFRTEAAHVVAEKIFGPPKGSLSPEPVNHRFYLPGSLSQIVLHAAPGYEPLPKPCSLHFSDIVQVTELSKKSDITDNSETQSGSLDAESASDYSSQHSDSGSSFSDGSKDSGYASEADDNADPLIEISDSRTPYKGQNGDGGESNYSQSESSGVENILSKRALESWLGEQPVSLDLKPSEHDQAQRSARIFISDISSRVKPKSYTLLDAASGQGLKIDYSFSSQMSDISPLLVCVEVFFKNCSNASLSKVILVDDGSNRVPDSTEQSSVTTERSSHSHDTVPTLVPMEEIDSVEPDQIIKRILHVRFHHHLLPLKLSVWCSGKKHVVKLRPDIGYFIKPLEMDIGAFRSKESQLPGMFEYVRRQLSTMWPTLLRSVNIFSCVDGSPCCK*

Click here to download the sequence:
Link to NCBI Protein BLAST