Transcript Information: R_Transcript_111621.p2


Annotated TAIR IDAT3G48190.1
Annotated Gene Nameataxia-telangiectasia mutated
Annotated Gene Symbol(s)ATM, ATATM
Annotation TypeHomolog
Chromosome Positionchr3:17797628-17828361 | Forward length=3845
E-Value4E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20980414890481
Replicate 20.16089119092949
Replicate 30.17553055629236
Condition 2: 8 Hour
Replicate 10.093815574510518
Replicate 20.25702163035845
Replicate 30.20863920253318
Condition 3: 24 Hour
Replicate 10.35184378893033
Replicate 20.16900581525347
Replicate 30.16772187499538


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_111621.p2 GENE.R_Transcript_111621~~R_Transcript_111621.p2 ORF type:5prime_partial len:261 (+),score=50.15 R_Transcript_111621:3-785(+)
GATTTGTTATCTTTAATTTCTTGTGGTTTCTTAGTTTTGCCGGTTGTTACATGGGATATTTTGTTCGAGATCCTGAGCACTGAAAGGTCTCCTAAGGCAGGTGAAAACATTCTTCAGTTTCTTTGCCAAAATCTTCAATCATCATCATTGACTAAGTTGACTGATTTGGTTAGTATGATGGATGAAATGACTGAGCTTAAAGTAACTCTGAAGCTCAATTGTTTTGATGTGCTTACTCCAGTCTGTTGCTTATTGTCAACATTATTATCCTTGCGTCGTAGTGGGAACGGTAAAGATGGGGTTCTATCCTTGAAGGAAAGAGATACTGAGCAGAGCTTGTTGCCTCTAGGAGATCTATTGAGCAAAGTCTTTGGGTTGAACTTACTTGATTGGCATGGACGTGTAAAGATGGCCGACTGCATATGTGATTTTGTTTGTGTTGATCCTATCATTGGCCAGACAATGATCCCAAAGTTGCTGATATTGCTACGAGATCCTGATTACAGAGTCAGGCTTTTCCTGGCTAGAAGACTTGGTGTTCTTTTCCTCATTTGGGATGGTCATAGTGAGCTTTTTCAGGATATTTGCTCCAACTTTGGTTCAAAATTGATACTGTCCTCCAAAGAAAAACTTGTTACTGCAATGGAGGTCTTAGCTGCTGGTGCTCAACCTCGTCCGACAACAGAAACCATTGTTATTACTCTTATGCATATCGCATTTTATAGTGAGAAAGTGGAGTTGGAGGTATATTTGATCCTAGAGGATGTACTTTTCAATCCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_111621.p2 GENE.R_Transcript_111621~~R_Transcript_111621.p2 ORF type:5prime_partial len:261 (+),score=50.15 R_Transcript_111621:3-785(+)
DLLSLISCGFLVLPVVTWDILFEILSTERSPKAGENILQFLCQNLQSSSLTKLTDLVSMMDEMTELKVTLKLNCFDVLTPVCCLLSTLLSLRRSGNGKDGVLSLKERDTEQSLLPLGDLLSKVFGLNLLDWHGRVKMADCICDFVCVDPIIGQTMIPKLLILLRDPDYRVRLFLARRLGVLFLIWDGHSELFQDICSNFGSKLILSSKEKLVTAMEVLAAGAQPRPTTETIVITLMHIAFYSEKVELEVYLILEDVLFNP*

Click here to download the sequence:
Link to NCBI Protein BLAST