Transcript Information: R_Transcript_111622.p1


Annotated TAIR IDAT3G48190.1
Annotated Gene Nameataxia-telangiectasia mutated
Annotated Gene Symbol(s)ATM, ATATM
Annotation TypeOrtholog
Chromosome Positionchr3:17797628-17828361 | Forward length=3845
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2646828962097
Replicate 22.0933185284786
Replicate 32.7772697887119
Condition 2: 8 Hour
Replicate 12.1836091987022
Replicate 21.8148611514389
Replicate 32.2734983241968
Condition 3: 24 Hour
Replicate 13.2550398023248
Replicate 22.5524873766149
Replicate 33.0375221434221


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_111622.p1 GENE.R_Transcript_111622~~R_Transcript_111622.p1 ORF type:complete len:1996 (+),score=413.89,PI3_PI4_kinase|PF00454.23|3.6e+03,PI3_PI4_kinase|PF00454.23|3.9e-49,FATC|PF02260.16|5.2e+03,FATC|PF02260.16|1.2e-11 R_Transcript_111622:277-5988(+)
ATGGAGTTGGAGGCTGTTTTCATGATATGTGTCATTTCTGCAATTGATCCTTGTCAAAGGGAACTGGTCAAAGCTGTTTTAGATAATCTCGCAAAGCAGCTCCATTATACTTGTCGGTCAAAGTATCTGGAAGAAGTTATGGGTCCGCTTTTGTTTAGTTGGGTTGCTTGTGGTGTGAGCTTACCTGCACTTGTTGAGATAAGGGATCTTTTTGTTTTAGATGTAGAGCCAAACCATTTTATGCTCTATTGTTGCCAGTGGCTCCTCCCTGCTCTTGTCCTGCATGGTGACAACTCTAGCCTGCAATGGTTAGCTGGGATTACTAGAGAACATCTTGCTGCTCTGGTTAGAAGTCACTTTGTGCCAGTCTTTTCAGTCTGCATGGCATTACACTGCAGTAAGAAATCTGGCTCGGAAAAGGGAACAGCTGTGTTACAGAACAAAATTTTGCACTTAGCTGAGATTTCTGAGGATGAGAGGGACAAGCTTATAAAGAAACACATGGTTACAATAGTCTGCCAAATCCTCAGTCTGGCTTCATCTGCATCCGAGGCTGCCATTCCGTTTTTTTCCAGGGAGATAGTTGAGCTTGCAGTTCGAACAATTGTTGATGGTTTTCTCGAACTGGAAGACTACAAAACTAGTGAGGGTGTTGTTGACAAGATAAATGTTTTTCGTTCTGATAGAGTTTTTATGCTTCTTGTTGAGTTGCACTACAAAGTTACAGCAGCAGTTGATCACCGGCATAAGTCTTACCGTCTAGCTGGAGTGGAGGTGCTTATAAACATCCTGGGGCATAGAGTAGCAGTCGCAAGCACCTCTTGTTACTTGTTCAATTTGGTCGGCCAATTTATCAGTTCTGAGGCTTTACAAGATCAATGTTGCCGTATGATATCCATTTTGCTAGAATCATTTAAGAGTAATCCTTCCAAGGAGACAACTCAGGTTCTTGGTGAACAACTACAGTTTCTGGTGTCAAAATTGGTTGCCTGTTGTATTCCCTTGGAGAAGGCCGAAGATTCATATGTTCCTTCACCCCAAGTTTTGTCATTGCTTCACCTTCTGACGGTGGATGCTGATCCATCTCTTCATGACTTTATCAGGGAGTTTGAACCTTTTCCAGAATTAGCTATATTTGACAGGATAAGGACATTCCATCTTGAACTATGCAGAGCATACTCGCCAAGGGACCACTTTTTGAAGTTTGCCAAGAGATCGTGCCACCTTCCACCAAGATTGCTTCTATGGAGTCTCCAAGCACTTCATAAGAAGTTACTCGGTGGAGAAATTTTTTTTCTTGAGGAAATTGAGGAGAACAATGCTAGGAGTAATTACCTGCACTCTGACCTGGAAATCATGCAAGCTGTCTGGTCACTTGTTCGTATATGTGGCGCAGAGGATGCAGATAGTGCTCGAGCCTTGGTGTCTGATTTCATTTCTAAGATTGGAATTGGAGATCCACGTTCTGTGGTTTTCCATCTTCCTGGAAATTCGGGTCACATTCATGTTTGTGGAGCAGTTGACTACAATGGTGTTTCTGAGACCAACCTTAGGATGGATGCCGTTACATCTGATGAATTGTTAGTTGCTCTCATCAGAATTTTGAAGAAATATCTAATGGATGATTCAGTTAAAATAGTTGATTTGTCATCTCAAATTCTTTATGGTATTCTCTCAACAGAAAGAGGCCATAGAGTTCTGCAATCATTTGACTCTTATGAACGTTCTCTTATTGAGGTTCATTCTAAAGGGGTCAACTTGCAGCTGGTAGAGAACATTCTATTTGATCTGCAAAAGAAGTTTACAGCTGAAGGGAAATCCTTGGAGGATGTATCACTGTGGAGTACCAGTGAAAAAACATTGGAGTCCTGGATATGCCCTCTTGTTTATTCACTAATTGGTTACTGCACTGATGTTACACTGAGATTATGTCAAGATCTTGTGTTGCTCAAGGCTGAAATTGCTGAACTTCTACTACCAAGTACTTTGGTCAATCTAGCAGGAAGGAATGATTTAGCTATTGATTTCTGCAAAGTTATCTCTGTCCAGGTGGAGCAGCACATACTTGCTGAGACGAATTATTTAATCAAGTCTATTCAGGTGATATTAGATGCTCTCAATGAACTCCGGCTATGTTATGTTATGGAGAGAGCGGCTACGGCTTCATTACCAAACAAACAGGAGAGCTTAAAGTTTTCTCGTTCTTCTTCTGGGCATAATGCGAAATCGCGGGCATATATGAAGGCCCGACAACAAGGCACTTCAAAGAGTTCAGTGGTGGTCTCCACTGAACTATGGAACAAGGTCTATTGGCTTAGCATTGATTACCTCACTGTAGCAAAGTCAGCAATTTTCTGTGGGTCATACTTTACTGCTGTGATGTATGTGGAGCACTGGTGTGAGGAGCACTTCAAGAACCTTACGCTTGGAAAACCTGATTTTTCTCATGTTGAAACACTGACCAATCATATCGAGATATTGATGTCAGCCCTCACACGGATCAATGAGCCGGACAGCTTGTATGGGGTCGTGCAATCGCACAAGCTGACCTCTCAAATAGTAACCTTTGAACATGAGGGTAACTGGAGCAAGGCACTTGAATATTATGATTTGCAAGTGAGGTCAGAGGCAATGGAAAAATCTCAAACAAATATATCTCCTCAAAATTGTCCAGTAAAATTATGCTCGTCCTTCTCTGAAGCTGAACTTGAGGTGGAGCACAGGAAGCCATACAAAGGAGTCATTAGATCTCTGCAGCAAATTGGCTGTGCTCACATTCTTGATTTATATTGTCAAGGACTTGTTTCTCGTAAAGCTGAATTCCAACATGATCTGGAATTTGTAGAACTTCAGTATGAGGCAGCTTGGCGTACTGGAAACTGGGACTTCTCTTTGTTTCACATAGGAGATATTTATATGACCTCATATCAACATATCAGAAGTGATCCTTTCAATCAGAACTTGCACAGCTGTTTGAGGGCCTTGCAAGAAGGAGATTCCAGTGAATTTTACAGACAACTAAAGGATTCGAAGCAGGAGCTTGTATTGTCTCTTTGTCGCGCTAGCGAGGAACGCACAGAGTACATCTACTCGACCATAGTTAAACTACAGATCCTAGATCACCTGGGTATGACGTGGGATCTAAGATGGGGACCATCATTCAGAAGTATAAATCGCTGCATGGAAAAACATAATGTATTCTCTGAACCTGCTGTCCCAACAACAGATCAGCTGTCAAGGTTGAGTACCCAGTGGCTTTCCATTTTGAAGCAAACACAGTTGCATATGAATTTACTAGAGCCCTTCGTGGCGTTCAGGAGAGTTCTGCTTAAAATTATAGGATCTAGGGATTATGTTCTCCACTATCTTCTACAATCATCATCTGTTCTACGCAAGGGATCTATGTTCTCTCAAGCTGCTGCATCTCTGCAAGAATTTAAACTCTTGTGCATGGAATTGGGCGGCGAAGAAACTAATCTGTATTGGCTTGGAAGGCTTGAAGAGGCCAAGCTTCTGCGAGCACAAGGTCAACAACAGATGGCTATCAACCTTGGTAAATATATTGCAGAAAGTAATCTATCAAGTGAGGAATCATCAGATGTTCACCGTTTGGTTGGCAAGTGGCTCGCAGAAACTCGATCTAGCAACTCTCGGACAATCTTGGAGAAGTATTTGAAGCGTGCAGTGTCTTTTTGTGAGGAGCACAGGAATGTAGACAGGAAATCGTTGGAAAGAAGATGTCAGACACATTTCCATCTTGCACATTATGCAGATGCACTATTTAGAAATCATGAAGAAAGGCTTAATTCCAGTGAATGGCAAGCAGCCATGCGTTTGAGGAAGCACAAGAAAATGGAGTTGGAAGCGCTCATCAAGCGATTAAGGAGCTCAACAAAGGGGGAAAAAACAGACTATTCGCTGAAGATACAGGAATTACAGAAACAACTTACCATGGACACTGAGGAAGCAGAAAAGTTACAGGATGACAGAGACAATTTTCTCAATTTGGCTTTGGAGGGATATAAGCGTTGCCTGGTGATTGGAGACAAATATGATGTTAGAGTGGTATTTAGACTTGTTTCACTCTGGTTTGGTCTTTCTTCTAGGCAAAATGTTACAAGTGCCATGGCTAACACAGTTAATGAGGTCCAATCATACAAGTTTATACCACTTGTCTATCAAATTGCTTCAAGATTGGGTAGCACTAAAGAGGCTCAAGGTCCACAAAGCTTTCAGTTTGCTTTGGCTTCTCTTGTGAAGAAAATGGCTATTGAGCACCCATACCATACCATACTGCAGCTTTTGGCTCTTGCAAATGGTGACCGGATAAAGGACAAGCAGCGCAGCAGAAATTCTTTTGTGGTAGATATAGACAAAAAGCTTGCAGCAGAGAAGCTTTTGAAAGAGTTACTATCACATCACAGGACCATCATTGGACAGATGAAACAAATGGTGGAGATCTACATCAAACTAGCTGAGCTGGAGACAAAAAGAGAGGACACCAACAAGAAGATCAGCCTTCCAAGAGATATTCGGAGTGTTCGGGAACTTGAGCTTGTACCTGTGGTGACATCCAGTTTTCCTGTTGACCGTAGTTGCCAATATCGTGAAGGCACTTTCCCTCATTTCAAAGGATTAGCTGATTCAGTAGTAGTGATGAATGGTATCAATGCTCCAAAGGTGGTTGAATGCTATGGCTCTGATGGTAAAACATACAGACAGCTGGCAAAATCTGGAAATGATGATCTTAGACAAGATGCAGTTATGGAGCAGTTTTTTGGCTTGGTTAACACCTTTTTACATAACAATCGTGACACATGGAAAAGAAAATTAGGAGTGCGCACATATAAGGTTGTTCCATTTACCCCAAGTGCTGGTGTCATTGAATGGGTGGATGGTACACTTCCCCTGGGTGAATATCTTATAGGAAGCTCACGAAATGGAGGGGCACATGGACGGTATGGTGTCGGAGACTGGTCATTCTCAAAATGTCGGGAGCACATGATGAATGCCAAAGATAAACGTAAGGCGTTTCAGGAAGTCTATGAAAATTTCAGGCCTGTCATGCACAACTTCTTTCTGGAGAGATTTTTGCAACCTGCTGATTGGTTTGAGAAAAGGTTGGCTTACACTCGGAGTGTTGCAGCTAGCTCAATGGTTGGATACATTGTTGGACTGGGAGATCGGCATTCCATGAATATCTTAATTGATCAAGCTACTGCAGAAGTTATTCATATTGATCTCGGTGTTGCGTTTGAACAAGGCCTGATGCTAAAAACACCAGAACGGGTACCTTTCCGGCTCACAAGAGACATCATTGATGGGATGGGCGTTTCTGGAGTTGAAGGTGTTTTCAGAAGGTGTTGTGAAGAAACACTAGCCGTTATGCGGACTAATAAAGAAGCACTTCTAACTATAATTGAAGTTTTTATACATGATCCTCTTTATAAATGGGCTCTTTCCCCCCTAAAGGCATTGCAAAGGCAAAAGGAGACAGATGATGATCTTGAGACAAGTTGGGAAGACTCCCAAGATGAATATGAGGGGAATAAGGATGCTGCACGTGCACTGATGCGTGTCAAACAAAAACTGGATGGATATGAAGATGGTGAAATGCGTAGTGTGCATGGGCAGGTTCATCAGCTTATCCAAGACGCCATTGACCCAGAGCGACTGTGCCATATGTTTCCTGGATGGGGTGCATGGATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_111622.p1 GENE.R_Transcript_111622~~R_Transcript_111622.p1 ORF type:complete len:1996 (+),score=413.89,PI3_PI4_kinase|PF00454.23|3.6e+03,PI3_PI4_kinase|PF00454.23|3.9e-49,FATC|PF02260.16|5.2e+03,FATC|PF02260.16|1.2e-11 R_Transcript_111622:277-5988(+)
MELEAVFMICVISAIDPCQRELVKAVLDNLAKQLHYTCRSKYLEEVMGPLLFSWVACGVSLPALVEIRDLFVLDVEPNHFMLYCCQWLLPALVLHGDNSSLQWLAGITREHLAALVRSHFVPVFSVCMALHCSKKSGSEKGTAVLQNKILHLAEISEDERDKLIKKHMVTIVCQILSLASSASEAAIPFFSREIVELAVRTIVDGFLELEDYKTSEGVVDKINVFRSDRVFMLLVELHYKVTAAVDHRHKSYRLAGVEVLINILGHRVAVASTSCYLFNLVGQFISSEALQDQCCRMISILLESFKSNPSKETTQVLGEQLQFLVSKLVACCIPLEKAEDSYVPSPQVLSLLHLLTVDADPSLHDFIREFEPFPELAIFDRIRTFHLELCRAYSPRDHFLKFAKRSCHLPPRLLLWSLQALHKKLLGGEIFFLEEIEENNARSNYLHSDLEIMQAVWSLVRICGAEDADSARALVSDFISKIGIGDPRSVVFHLPGNSGHIHVCGAVDYNGVSETNLRMDAVTSDELLVALIRILKKYLMDDSVKIVDLSSQILYGILSTERGHRVLQSFDSYERSLIEVHSKGVNLQLVENILFDLQKKFTAEGKSLEDVSLWSTSEKTLESWICPLVYSLIGYCTDVTLRLCQDLVLLKAEIAELLLPSTLVNLAGRNDLAIDFCKVISVQVEQHILAETNYLIKSIQVILDALNELRLCYVMERAATASLPNKQESLKFSRSSSGHNAKSRAYMKARQQGTSKSSVVVSTELWNKVYWLSIDYLTVAKSAIFCGSYFTAVMYVEHWCEEHFKNLTLGKPDFSHVETLTNHIEILMSALTRINEPDSLYGVVQSHKLTSQIVTFEHEGNWSKALEYYDLQVRSEAMEKSQTNISPQNCPVKLCSSFSEAELEVEHRKPYKGVIRSLQQIGCAHILDLYCQGLVSRKAEFQHDLEFVELQYEAAWRTGNWDFSLFHIGDIYMTSYQHIRSDPFNQNLHSCLRALQEGDSSEFYRQLKDSKQELVLSLCRASEERTEYIYSTIVKLQILDHLGMTWDLRWGPSFRSINRCMEKHNVFSEPAVPTTDQLSRLSTQWLSILKQTQLHMNLLEPFVAFRRVLLKIIGSRDYVLHYLLQSSSVLRKGSMFSQAAASLQEFKLLCMELGGEETNLYWLGRLEEAKLLRAQGQQQMAINLGKYIAESNLSSEESSDVHRLVGKWLAETRSSNSRTILEKYLKRAVSFCEEHRNVDRKSLERRCQTHFHLAHYADALFRNHEERLNSSEWQAAMRLRKHKKMELEALIKRLRSSTKGEKTDYSLKIQELQKQLTMDTEEAEKLQDDRDNFLNLALEGYKRCLVIGDKYDVRVVFRLVSLWFGLSSRQNVTSAMANTVNEVQSYKFIPLVYQIASRLGSTKEAQGPQSFQFALASLVKKMAIEHPYHTILQLLALANGDRIKDKQRSRNSFVVDIDKKLAAEKLLKELLSHHRTIIGQMKQMVEIYIKLAELETKREDTNKKISLPRDIRSVRELELVPVVTSSFPVDRSCQYREGTFPHFKGLADSVVVMNGINAPKVVECYGSDGKTYRQLAKSGNDDLRQDAVMEQFFGLVNTFLHNNRDTWKRKLGVRTYKVVPFTPSAGVIEWVDGTLPLGEYLIGSSRNGGAHGRYGVGDWSFSKCREHMMNAKDKRKAFQEVYENFRPVMHNFFLERFLQPADWFEKRLAYTRSVAASSMVGYIVGLGDRHSMNILIDQATAEVIHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGVSGVEGVFRRCCEETLAVMRTNKEALLTIIEVFIHDPLYKWALSPLKALQRQKETDDDLETSWEDSQDEYEGNKDAARALMRVKQKLDGYEDGEMRSVHGQVHQLIQDAIDPERLCHMFPGWGAWM*

Click here to download the sequence:
Link to NCBI Protein BLAST