Transcript Information: R_Transcript_11176.p1


Annotated TAIR IDAT5G38720.1
Annotated Gene Nameunknown protein; Has 13419 Blast hits to 9093 proteins in 698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949; Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes - 5779 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15508417-15510472 | Reverse length=306
E-Value3E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2882847628382
Replicate 24.5257043300148
Replicate 36.7182304610624
Condition 2: 8 Hour
Replicate 15.0183044768206
Replicate 25.926028756498
Replicate 35.5801771165147
Condition 3: 24 Hour
Replicate 19.0857752985967
Replicate 29.3520532398208
Replicate 310.286447785715


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11176.p1 GENE.R_Transcript_11176~~R_Transcript_11176.p1 ORF type:complete len:283 (+),score=90.92,RRP7|PF12923.3|1.6e+04,RRP7|PF12923.3|3.7e-34 R_Transcript_11176:195-1043(+)
ATGGGAAGTAATAAGCCAGAAAAGAGGACCAAGAAGACCAAAAAGCGTCGCAAATCAGAGCTAGAGATTGCCCCAGATGATCAAAGTACAGTTGATGCAAGCCCAACAAAGTACAAAGACAGGTCTCCAACTATTGATAAAAATGAGGATGGCGCTGCTGGTGCAGGCGTCACAACTAAGAAGTCAAAGAAAGCATGTAGAAACCAGAAGAAAAATACCATTATTTTAAGTGAACTTAAGGAGGCTGCAAGCAAGGGAGAACTTGAACCAGATTCAGAGCATTGCTCAAGAGTGAAAAAAGGCAAGTTGAAGAAAGCTCTCAAATGCAAGGAGCGCCGATTGTCAAATAAAGAAAGCAAGTCAGCACAGGAGGCGCAGGAGATGCAAGAAGTTAAAAGGCAGGATGTTTATCCGATCTCTTCAGGAGAGGATAATAGCTCTCAAGGGATGAAAAAATGGATTAAGGAATACTATGAGAAGAGACCTGGGCTGAACGTGCTGCAGCAAAGAATTGATGACTTTATAACTTCGCATGAGGAGCAGAAGGAGCAGGCTAGAAAGGAGAGAGAGGCCAAAATTGCTGAGGAGGGGTGGACTGTTGTTGTACACCGTAAGGGTGGAAAAAAGACAGCTGATCCTGAGAGTGGTGTTGCTGTGGGCTCTGTGGCAGAGGCTGCTGTGCGTGATAAGATGGCCAAGAAAAAGAGCAAGGATGTGGGGCTTGATTTCTATCGGTTTCAAAGGAGAGAAGCCAAGAGAAATGAGATTATGCAGCTGCAAAGTAAATTTGAGGAGGACAAGAAGCGGATACAGCAATTACGAGCGGCAAGGAAGTTTAGACCTTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11176.p1 GENE.R_Transcript_11176~~R_Transcript_11176.p1 ORF type:complete len:283 (+),score=90.92,RRP7|PF12923.3|1.6e+04,RRP7|PF12923.3|3.7e-34 R_Transcript_11176:195-1043(+)
MGSNKPEKRTKKTKKRRKSELEIAPDDQSTVDASPTKYKDRSPTIDKNEDGAAGAGVTTKKSKKACRNQKKNTIILSELKEAASKGELEPDSEHCSRVKKGKLKKALKCKERRLSNKESKSAQEAQEMQEVKRQDVYPISSGEDNSSQGMKKWIKEYYEKRPGLNVLQQRIDDFITSHEEQKEQARKEREAKIAEEGWTVVVHRKGGKKTADPESGVAVGSVAEAAVRDKMAKKKSKDVGLDFYRFQRREAKRNEIMQLQSKFEEDKKRIQQLRAARKFRPY*

Click here to download the sequence:
Link to NCBI Protein BLAST