Transcript Information: R_Transcript_11178.p1


Annotated TAIR IDAT5G38720.1
Annotated Gene Nameunknown protein; Has 13419 Blast hits to 9093 proteins in 698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949; Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes - 5779 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15508417-15510472 | Reverse length=306
E-Value3E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.230795141255
Replicate 213.521617468096
Replicate 317.225866672307
Condition 2: 8 Hour
Replicate 112.340875933412
Replicate 213.77430321417
Replicate 315.828204460977
Condition 3: 24 Hour
Replicate 126.631056384137
Replicate 219.408627823708
Replicate 320.136688311945


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11178.p1 GENE.R_Transcript_11178~~R_Transcript_11178.p1 ORF type:complete len:250 (+),score=82.82,RRP7|PF12923.3|1.6e+04,RRP7|PF12923.3|2.7e-34 R_Transcript_11178:384-1133(+)
ATGGGAAGTAATAAGCCAGAAAAGAGGACCAAGAAGACCAAAAAACGTCGCAGCTCAGAGCTAGAGATTGCCCCAAATGAGAAGTCAAAGAAAGCACGTAGAAACAAGAAGAAAGATACCGTTATTTCAAGTGAACTTCAGGAGGCTGCAAGCAAGGGAGAAGTTGAACCAGATTCAGAGGATTGCCCAAGAGCGAAAAAAGGCAAGTCGAAGAAAGCTCGTAAAGGCAAGGAGCACCAATTGTCAAATAAAGCAAGCAAGTCAGCACAGGAGGCACCGGAGATGCAAGAAGTTAAAAGTCAGGATGTTTATCAGATCTCTTCAGGAGAGGATAATAGCTCTCAAGGGATGAAAAAATGGATTAAGGAATACTATGAGAAGAGACCTGGGCTGAACGTGCTGCAGCAAAGAATTGATGACTTTATAACTTCGCATGAGGAGCAGAAGGAGCAGGCTAGAAAGGAGAGAGAGGCCAAAATTGCTGAGGAGGGGTGGACTGTTGTTGTACACCGTAAGGGTGGAAAAAAGACAGCTGATCCTGAGAGTGGTGTTGCTGTGGGCTCTGTGGCAGAGGCTGCTGTGCGTGATAAGATGGCCAAGAAAAAGAGCAAGGATGTGGGGCTTGATTTCTATCGGTTTCAAAGGAGAGAAGCCAAGAGAAATGAGATTATGCAGCTGCAAAGTAAATTTGAGGAGGACAAGAAGCGGATACAGCAATTACGAGCGGCAAGGAAGTTTAGACCTTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11178.p1 GENE.R_Transcript_11178~~R_Transcript_11178.p1 ORF type:complete len:250 (+),score=82.82,RRP7|PF12923.3|1.6e+04,RRP7|PF12923.3|2.7e-34 R_Transcript_11178:384-1133(+)
MGSNKPEKRTKKTKKRRSSELEIAPNEKSKKARRNKKKDTVISSELQEAASKGEVEPDSEDCPRAKKGKSKKARKGKEHQLSNKASKSAQEAPEMQEVKSQDVYQISSGEDNSSQGMKKWIKEYYEKRPGLNVLQQRIDDFITSHEEQKEQARKEREAKIAEEGWTVVVHRKGGKKTADPESGVAVGSVAEAAVRDKMAKKKSKDVGLDFYRFQRREAKRNEIMQLQSKFEEDKKRIQQLRAARKFRPY*

Click here to download the sequence:
Link to NCBI Protein BLAST