Transcript Information: R_Transcript_111794.p1


Annotated TAIR IDAT5G19020.1
Annotated Gene Namemitochondrial editing factor 18
Annotated Gene Symbol(s)MEF18
Annotation TypeHomolog
Chromosome Positionchr5:6352771-6354828 | Reverse length=685
E-Value6E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0163154543003
Replicate 21.0986436264342
Replicate 31.9976806043156
Condition 2: 8 Hour
Replicate 12.9895532784427
Replicate 23.6401435555418
Replicate 33.588109076123
Condition 3: 24 Hour
Replicate 12.6695124683377
Replicate 22.179880239185
Replicate 33.308606522438


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_111794.p1 GENE.R_Transcript_111794~~R_Transcript_111794.p1 ORF type:5prime_partial len:172 (+),score=41.92,PPR|PF01535.16|28,PPR|PF01535.16|0.00088,PPR|PF01535.16|0.0021,PPR|PF01535.16|0.86,PPR|PF01535.16|0.28,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|0.71,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|0.31,PPR_2|PF13041.2|0.00014,PPR_2|PF13041.2|0.033,PPR_2|PF13041.2|0.21,PPR_2|PF13041.2|15,PPR_2|PF13041.2|14,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|0.0035,PPR_1|PF12854.3|0.0092,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|1.1e+03 R_Transcript_111794:2-517(+)
GCTGTTCATGGGCATGGTGCCGAAGCTCTGAAACTTTTCGGGAAGCTTGAGATAGACGGAATCACTCCTAATGGCATTACATTTGTCGCGGTGTTATCTGCTTGTTGCCATGGCGGCTTCCTTGAAGAAGGCCGTGAGTTTTTTCATTCAATGAGGATATATCACAACATTGAGCCCCAAATAGCACACTATGGGTGTATGGTTGATCTTCTCGGGCGAGCAGGGAAGCTAGTTGAAGCGGAGCAATTGATACGATACATGGTAGGGAAAGCAGATGTGATGATTTGGGGAGCTCTGTTGACTGCTTGTAGGAGATCAGGAAATATTGAGGTTGCAGAAAGGGCAGTGAAAGAAATTGTAGCTTTGGATCATCATAATCACGGAGTGTATGTTGTTTTGTCCAATATGTATGCAGAAGCTGGGAGATGGGAAGATGTTTCCAAGCTGAGAAAGGTGATGAAGGAGGGAAACTTGAAGAAGATTCCTGGGTTTAGTTCAGTGAATGATGTAAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_111794.p1 GENE.R_Transcript_111794~~R_Transcript_111794.p1 ORF type:5prime_partial len:172 (+),score=41.92,PPR|PF01535.16|28,PPR|PF01535.16|0.00088,PPR|PF01535.16|0.0021,PPR|PF01535.16|0.86,PPR|PF01535.16|0.28,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|0.71,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|0.31,PPR_2|PF13041.2|0.00014,PPR_2|PF13041.2|0.033,PPR_2|PF13041.2|0.21,PPR_2|PF13041.2|15,PPR_2|PF13041.2|14,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|0.0035,PPR_1|PF12854.3|0.0092,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|1.1e+03 R_Transcript_111794:2-517(+)
AVHGHGAEALKLFGKLEIDGITPNGITFVAVLSACCHGGFLEEGREFFHSMRIYHNIEPQIAHYGCMVDLLGRAGKLVEAEQLIRYMVGKADVMIWGALLTACRRSGNIEVAERAVKEIVALDHHNHGVYVVLSNMYAEAGRWEDVSKLRKVMKEGNLKKIPGFSSVNDVN*

Click here to download the sequence:
Link to NCBI Protein BLAST