Transcript Information: R_Transcript_111995.p1


Annotated TAIR IDAT3G17060.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5816953-5818458 | Reverse length=344
E-Value5.3E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8793403196176
Replicate 24.2584045914745
Replicate 35.0975556904114
Condition 2: 8 Hour
Replicate 11.7243566864257
Replicate 21.385744790158
Replicate 31.891858008322
Condition 3: 24 Hour
Replicate 12.651465060101
Replicate 22.3608446136393
Replicate 33.2677418264945


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_111995.p1 GENE.R_Transcript_111995~~R_Transcript_111995.p1 ORF type:complete len:355 (+),score=60.61,Pectinesterase|PF01095.15|6.1e-62 R_Transcript_111995:1012-2076(+)
ATGAATTTGTTATCTTCATCATCTTCTTCTTCTTCATTAACAAAGGCAACAATTTCGATTGCCTTAGCCATTGTTTTCTTTGTACAGATTGTTGATGCATCAACTAGCCATGAATTACAAGTTCATAAAATCATTGATGCTCCTCACCTAACTGAAAAGATTCATACCAACCATACAATTTTGGTTGATATCAATGGCAATGGACACTTCAAATCTGTTCAAGCTGCAATTGATTCTGTTCCAGATGGGAATTCCAATTGGGTTATCATCCATGTTAGGAAAGGAGTTTACAAGGAGAAGGTGCACATACCCCATTCTAAGCCTTACATATTCTTAAGAGGGAATGGTAAGGGTAGAACTTTTATAACTTGGTCACAAAGCTCGGATGACAACATTGAGTCCGCCACATTCAGAGCTGAAGCCCCTCATTTCGTTGCCTTTGGAATAAGCTTCAAGAATGAGGCACCAACAGGGGAAGCATACACATCGCAGAATCAATCGGTGGCAGCATACGTGGCATCAGACATGGCTGCCTTTTACCATTGTGGGTTTTTCAGCACTCACAACACTCTCTTTGATGCCAAGGGTAGACATTACTATTATGCTTCTTACATCCAAGGCTCCATTGACTTCATCTTTGGCCGTGCTCGTTCCCTTTATTACGATTGTGAGATATTAGTGCTGGTGGATCGGAGGGTGAAAATACATGGCTCAATCACAGCTCATAATAAGGAACATGCAGAGGAGGAAAGTGGATTTGTGTTTAATGAGGGAAGAGTTTATGGCACAGACCAAGTTTATTTGGGTAGAGCTAGAGGTGCTTACTCAAGGGTGGTCTTTGCTAACATGTATTTGTCTAATACTATTACACCTGAGGGATGGACTAACTGGAGTTATGATGGCCCTACAGAGCACCTATTCCATGCAGAGTACTCATGCCATGGACCAGGATCAAACACAGGGGAAAGAGCTCCTTGGAGTAAAAGGCTTAGTGAGGAAGAAGCTGCTCCTTTCTTGTCCATTGATTTCATTAATGGCAAGGAATGGTTGCCAGCTTGGCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_111995.p1 GENE.R_Transcript_111995~~R_Transcript_111995.p1 ORF type:complete len:355 (+),score=60.61,Pectinesterase|PF01095.15|6.1e-62 R_Transcript_111995:1012-2076(+)
MNLLSSSSSSSSLTKATISIALAIVFFVQIVDASTSHELQVHKIIDAPHLTEKIHTNHTILVDINGNGHFKSVQAAIDSVPDGNSNWVIIHVRKGVYKEKVHIPHSKPYIFLRGNGKGRTFITWSQSSDDNIESATFRAEAPHFVAFGISFKNEAPTGEAYTSQNQSVAAYVASDMAAFYHCGFFSTHNTLFDAKGRHYYYASYIQGSIDFIFGRARSLYYDCEILVLVDRRVKIHGSITAHNKEHAEEESGFVFNEGRVYGTDQVYLGRARGAYSRVVFANMYLSNTITPEGWTNWSYDGPTEHLFHAEYSCHGPGSNTGERAPWSKRLSEEEAAPFLSIDFINGKEWLPAWL*

Click here to download the sequence:
Link to NCBI Protein BLAST