Transcript Information: R_Transcript_112130.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16248926665922
Replicate 20.12460712413233
Replicate 30.067972515122114
Condition 2: 8 Hour
Replicate 10.14531670591837
Replicate 20
Replicate 30.10772469210912
Condition 3: 24 Hour
Replicate 10
Replicate 20.065445872078864
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_112130.p1 GENE.R_Transcript_112130~~R_Transcript_112130.p1 ORF type:3prime_partial len:337 (+),score=15.18,RVT_1|PF00078.23|2.1e-40 R_Transcript_112130:2490-3497(+)
ATGTCTATGGGGAGAAATAAATCTCCTGGGCCAGATGGGTTTCCAGTGGAATTTTTCATTAGGCATTGGGATATAGTGGGAGGAGAATTGGCGGGTGCGGTTCAGCATTTTTTTGAGAATGGGTTTTTACTTAAGGAATGGAATAAAACATTCATCACTCTCCTACCTAAAGTTGACAGTCCGTTAGAGGTAAGCCACTTCAGGCCTATTGGGCTTTGCAATGTGGTATATAAAGGTATAGCCAGATGCTTGGTTAACAGATTGAAACTGGTCTTAAACGAAATTATATCCCCAAACCAGAATGCCTTCATTCCAGGGTGGTCCTTACAAGATAACAGTCTCTTAGCACATGAATTATTATCTTTTCTGCAAAGTAGAAGTTCTAAATATAAGACTTTCTATATGGCAATCAAACTAGATATGAACAAAGCTTATGATAGAATTAGTTGGAAATTCATCAGGGTTGTCATGATAAAAATGGGTTTCCCGGAGAGGTGGATCCACTGGATTATGCAAAGCATTACTACAGTCTCCTTTTCAATATTGTTAAATGGGGAACCAACTCCTTTCTTTAAACCAAAATGTGGCTTAAGGCAAGGGGATCCTCTATCCCCTTACCTATTCTTGTTATGCATGGAGGCTCTTTCAAAGTCTTTGCTAAAAGCACAAGAAAGGGGTCAAATTTCTGGAATTAAAGTGGCCCGAGGAGCACCGGCTATTAATCATCTCTTATTTGTCGATGACATTATTATGTTCTCCAAAGCCACTCCAAAGAACTGTTTTGAAGTTAAGAAAGTTCTGGATAAATTCTGCTTGGGTACAGGACAAAGGGTCAACAACAGTAAGTCTGCAATTTGTTTTAGCCCTAATACCCCAACCAGGTTTATCAGATATCTGAGAAGTATACTTCATATTCAAATTACTAAGGACCTGGGTATTTATCTAGGAGCTATAACGTTGGTTTCTAGGGCTACAGTATCGGTATTCTCGTCTTTAACAGACAAAATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_112130.p1 GENE.R_Transcript_112130~~R_Transcript_112130.p1 ORF type:3prime_partial len:337 (+),score=15.18,RVT_1|PF00078.23|2.1e-40 R_Transcript_112130:2490-3497(+)
MSMGRNKSPGPDGFPVEFFIRHWDIVGGELAGAVQHFFENGFLLKEWNKTFITLLPKVDSPLEVSHFRPIGLCNVVYKGIARCLVNRLKLVLNEIISPNQNAFIPGWSLQDNSLLAHELLSFLQSRSSKYKTFYMAIKLDMNKAYDRISWKFIRVVMIKMGFPERWIHWIMQSITTVSFSILLNGEPTPFFKPKCGLRQGDPLSPYLFLLCMEALSKSLLKAQERGQISGIKVARGAPAINHLLFVDDIIMFSKATPKNCFEVKKVLDKFCLGTGQRVNNSKSAICFSPNTPTRFIRYLRSILHIQITKDLGIYLGAITLVSRATVSVFSSLTDKI

Click here to download the sequence:
Link to NCBI Protein BLAST