Transcript Information: R_Transcript_112131.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10225748434016
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.187906570094
Replicate 30.25422423838077
Condition 3: 24 Hour
Replicate 10.12861516654176
Replicate 20.061779436668284
Replicate 30.30655048581089


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_112131.p1 GENE.R_Transcript_112131~~R_Transcript_112131.p1 ORF type:3prime_partial len:357 (+),score=17.18,RVT_1|PF00078.23|2.9e-38 R_Transcript_112131:2494-3561(+)
ATGTCTATGGGGAGAAATAAATCTCCTGGGCCAGATGGGTTTCCAGTGGAATTTTTCATTAGGCATTGGGATATAGTGGGAGGAGAATTGGCGGGTGCGGTTCAGCATTTTTTTGAGAATGGGTTTTTACTTAAGGAATGGAATAAAACATTCATCACTCTCCTACCTAAAGTTGACAGTCCGTTAGAGGTAAGCCACTTCAGGCCTATTGGGCTTTGCAATGTGGTATATAAAGGTATAGCCAGATGCTTGGTTAACAGATTGAAACTGGTCTTAAACGAAATTATATCCCCAAACCAGAATGCCTTCATTCCAGGGTGGTCCTTACAAGATAACAGTCTCTTAGCACATGAATTATTATCTTTTCTGCAAAGTAGAAGTTCTAAATATAAGACTTTCTATATGGCAATCAAACTAGATATGAACAAAGCTTATGATAGAATTAGTTGGAAATTCATCAGGGTTGTCATGATAAAAATGGGTTTCCCGGAGAGGTGGATCCACTGGATTATGCAAAGCATTACTACAGTCTCCTTTTCAATATTGTTAAATGGGGAACCAACTCCTTTCTTTAAACCAAAATGTGGCTTAAGGCAAGGGGATCCTCTATCCCCTTACCTATTCTTGTTATGCATGGAGGCTCTTTCAAAGTCTTTGCTAAAAGCACAAGAAAGGGGTCAAATTTCTGGAATTAAAGTGGCCCGAGGAGCACCGCCTATTAATCATCTCTTATTTGCCAATGATATTATTCTGTTTTCCAAAGTCACGCCAAAGAATTGTTCTGAGATCAAGAAAGTTCTGGATAAATTTTGCTTCGGTACTAGACAAAGGATCAACAATAGTAAGTCTGCAGTTTGTTTTAGTCCAAATACCCCAACCAGGTTTATCAGATACATGAGAAGCATACTTCATATTCAGAGTACTAAGGACTTGAGTATTTATTTGGGGGCTATAACTATGGTTCGTAGGGCTACAGTATCGGCTTTCTCATCCTTAACAGACAAAATTCACCATGGATTGTCTAAGTGGGAAATTTCCTTATTCTCTCAGGCAGGTAAGTTGGTCCTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_112131.p1 GENE.R_Transcript_112131~~R_Transcript_112131.p1 ORF type:3prime_partial len:357 (+),score=17.18,RVT_1|PF00078.23|2.9e-38 R_Transcript_112131:2494-3561(+)
MSMGRNKSPGPDGFPVEFFIRHWDIVGGELAGAVQHFFENGFLLKEWNKTFITLLPKVDSPLEVSHFRPIGLCNVVYKGIARCLVNRLKLVLNEIISPNQNAFIPGWSLQDNSLLAHELLSFLQSRSSKYKTFYMAIKLDMNKAYDRISWKFIRVVMIKMGFPERWIHWIMQSITTVSFSILLNGEPTPFFKPKCGLRQGDPLSPYLFLLCMEALSKSLLKAQERGQISGIKVARGAPPINHLLFANDIILFSKVTPKNCSEIKKVLDKFCFGTRQRINNSKSAVCFSPNTPTRFIRYMRSILHIQSTKDLSIYLGAITMVRRATVSAFSSLTDKIHHGLSKWEISLFSQAGKLVL

Click here to download the sequence:
Link to NCBI Protein BLAST