Transcript Information: R_Transcript_112555.p1


Annotated TAIR IDAT1G65260.1
Annotated Gene Nameplastid transcriptionally active 4
Annotated Gene Symbol(s)PTAC4, VIPP1
Annotation TypeOrtholog
Chromosome Positionchr1:24236329-24240428 | Forward length=330
E-Value4.8E-145
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2996944887967
Replicate 22.5393755665729
Replicate 33.3785748666892
Condition 2: 8 Hour
Replicate 13.3947954351638
Replicate 24.4194073255441
Replicate 36.6395271885781
Condition 3: 24 Hour
Replicate 15.4177716171573
Replicate 23.1879282762191
Replicate 34.648716039695


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_112555.p1 GENE.R_Transcript_112555~~R_Transcript_112555.p1 ORF type:5prime_partial len:339 (+),score=80.61,PspA_IM30|PF04012.8|2.4e-53 R_Transcript_112555:2-1018(+)
CAATTTTCTCAATTGAGTTTTTCTTGTTTTTGGGAAACATACACTAAGATGGCTACACAGCAACAAGCACCGCCTATGACAGGCTTGAAATTTACTGCTGCTACAGTGCCTGGTCCTTCATTTAGGCTTTCTGTTGTGAGAGTTTGTTTGAGGTCTTCTTTTTTTGGCAACAATGTGGGAGCATTAAGAGTGAATGTAATTCGTTTAGCTCACTCAAATAGACTGAGGTGTAATGGCCATGGTGAGGGTGCTACGATGAACCTATTTGATCGGTTCGCTAGGGTCGTTAAGTCATATGCGAATGCAATTCTAAGCACTTTCGAAGATCCTGAGAAGATACTGGAACAAACAGTGCTTGAGATGAATGAGGACTTGACAAAGATGCGCCAATCTACAGCGCAAGTGTTGGCATCGCAAAAACAGTTGGAAAACAAGTATAAAGCTGCGCAACAAGCTTCTGAAGACTGGTACAAAAGGGCACAACTTGCACTTAACAAAGGGGATGAGGACCTTGCTCGTGAAGCTTTGAAGAGGCGCAAATCTTATGCTGATAATGCTAATGCCTTGAAAGCCCAGCTTGATCAGCAAAAGGGTGTTGTTGAATCTCTTGTCTCAAATACTAAGCTTTTGGAAAGCAAGATACAAGAGGCAAAGTCAAAGAAAGATACACTAAAAGCACGTGCTCAGTCTGCAAGGACTGCTACCAAAGTAAGTGAGATGGTGGGGAAAGTGAATACTAGTGGTGCTCTTGCTGCTTTTGAGAAAATGGAAGAAAAAGTGTTGGCTATGGAATCAGAAGCAGATGCACTTAATCAGTTAACCAGTGATGAGCTTGAAGGAAAGTTTGCATTGCTGGAGGGCTCATCTGTGGACGAGGACCTTCTTAACTTGAAGAAGGAATTGTCTGGCAGCTCAACGGTATTCTTCTGCATTTTTTTTTTCTTATGGTGGTGGTACTGCTCTGCTAGTTGTCAAGATGTCAAACTTATTTGTCCTTTAAAAATCATGAACTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_112555.p1 GENE.R_Transcript_112555~~R_Transcript_112555.p1 ORF type:5prime_partial len:339 (+),score=80.61,PspA_IM30|PF04012.8|2.4e-53 R_Transcript_112555:2-1018(+)
QFSQLSFSCFWETYTKMATQQQAPPMTGLKFTAATVPGPSFRLSVVRVCLRSSFFGNNVGALRVNVIRLAHSNRLRCNGHGEGATMNLFDRFARVVKSYANAILSTFEDPEKILEQTVLEMNEDLTKMRQSTAQVLASQKQLENKYKAAQQASEDWYKRAQLALNKGDEDLAREALKRRKSYADNANALKAQLDQQKGVVESLVSNTKLLESKIQEAKSKKDTLKARAQSARTATKVSEMVGKVNTSGALAAFEKMEEKVLAMESEADALNQLTSDELEGKFALLEGSSVDEDLLNLKKELSGSSTVFFCIFFFLWWWYCSASCQDVKLICPLKIMNW*

Click here to download the sequence:
Link to NCBI Protein BLAST